format-version: 1.2 date: 16:04:2010 13:29 saved-by: Darren Natale, Robert Williams auto-generated-by: OBO-Edit 2.0 default-namespace: dpo remark: release: 0.02, version alpha, 11000 lines. remark: Originated by Darren Natale using information from the Disprot database. remark: To DPO-edit, load dpo.obo together with so.obo and evidence_code.obo. [Term] id: DPO:000001 name: structural_class def: "." [DPO:curators] [Term] id: DPO:000002 name: function def: "." [DPO:curators] [Term] id: DPO:000003 name: subfunction def: "." [DPO:curators] [Term] id: DPO:000004 name: structural_basis_for_function def: "." [DPO:curators] [Term] id: DPO:000005 name: detection_method def: "." [DPO:curators] synonym: "evidence_code" EXACT [ECO:0000000] [Term] id: DPO:000006 name: ordered region namespace: structural_class def: "." [DPO:curators] is_a: DPO:000001 ! structural_class [Term] id: DPO:000007 name: disordered region namespace: structural_class def: "." [DPO:curators] is_a: DPO:000001 ! structural_class [Term] id: DPO:000008 name: disordered - extended region namespace: structural_class def: "." [DPO:curators] is_a: DPO:000001 ! structural_class [Term] id: DPO:000009 name: disordered - pre-molten globule region namespace: structural_class def: "." [DPO:curators] is_a: DPO:000001 ! structural_class [Term] id: DPO:000010 name: disordered - molten globule region namespace: structural_class def: "." [DPO:curators] is_a: DPO:000001 ! structural_class [Term] id: DPO:000011 name: chaperone namespace: function def: "Help other proteins or RNA in achieving proper folded state; prevent protein aggregation; help misfolded proteins to refold." [DPO:curators] is_a: DPO:000002 ! function [Term] id: DPO:000012 name: entropic chain namespace: function def: "Function as a result of disorder, often connecting two ordered domains and allow regulation of the distance between them." [DPO:curators] is_a: DPO:000002 ! function [Term] id: DPO:000013 name: metal sponge namespace: function def: "Store and help remove/neutralize heavy metals for detoxification." [DPO:curators] is_a: DPO:000002 ! function [Term] id: DPO:000014 name: modification site namespace: function def: "Permits protein modification, either by chemical additions or by protease cleavage." [DPO:curators] is_a: DPO:000002 ! function [Term] id: DPO:000015 name: molecular assembly namespace: function def: "Assemble, regulate, and stabilize protein complexes." [DPO:curators] is_a: DPO:000002 ! function [Term] id: DPO:000016 name: molecular recognition effector namespace: function def: "Allow the binding of multiple partners with high specificity and low affinity, and is commonly used for signaling." [DPO:curators] is_a: DPO:000002 ! function [Term] id: DPO:000017 name: molecular recognition scavenger namespace: function def: "Store and/or neutralize their ligands." [DPO:curators] is_a: DPO:000002 ! function [Term] id: DPO:000018 name: acetylation namespace: subfunction def: "Guides the addition of an acetyl group during chemical modification of the protein." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000019 name: ADP-ribosylation namespace: subfunction def: "Regulates vesicle biogenesis in intracellular traffic; may modulate vesicle budding and uncoating within the Golgi apparatus; is involved in protein trafficking." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000020 name: apoptosis namespace: subfunction def: "Regulation Regulation of cell fate." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000021 name: autoregulatory namespace: subfunction def: "Involved in the regulation of protein function/activity." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000022 name: cofactor/heme binding namespace: subfunction def: "Binds to the appropriate cofactor(s) and/or heme(s)." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000023 name: disordered region is not essential for protein function namespace: subfunction def: "Region has been shown experimentally to perform no function." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000024 name: DNA bending namespace: subfunction def: "Mediates DNA bending." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000025 name: DNA unwinding namespace: subfunction def: "Promotes the unwinding of DNA." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000026 name: electron transfer namespace: subfunction def: "Participates in the electron transfer." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000027 name: entropic bristle namespace: subfunction def: "A disordered region that creates a zone of exclusion by its entropic movement." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000028 name: entropic clock namespace: subfunction def: "Provide a timing mechanism arising from random searches such as those observed in the ball-and-chain model for closure of voltage-gated ion channels." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000029 name: entropic spring namespace: subfunction def: "Provides a restoring force resulting from randomization of bond torsion angles that become restricted upon stretching." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000030 name: fatty acylation (myristolation and palmitoylation) namespace: subfunction def: "Guides the addition of a fatty acyl group during chemical modification of the protein." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000031 name: flexible linker/spacer namespace: subfunction def: "Provides separation and permits movement between adjacent domains." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000032 name: glycosylation namespace: subfunction def: "Guides the addition of a sugar, such as a glycan, during chemical modification of the protein." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000033 name: intraprotein interaction namespace: subfunction def: "Directs the binding of the disordered region to another location within the parent protein." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000034 name: metal binding namespace: subfunction def: "Binds to metal ions." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000035 name: methylation namespace: subfunction def: "Guides the addition of a methyl group during chemical modification of the protein." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000036 name: nuclear localization namespace: subfunction def: "Acts as a tag on the protein surface to confine the protein to the cell nucleus through the nuclear pore complex." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000037 name: phosphorylation namespace: subfunction def: "Guides the addition of a phosphate to the protein." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000038 name: polymerization namespace: subfunction def: "Facilitates polymerization." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000039 name: protein detergent namespace: subfunction def: "Binds to hydrophobic groups, thus making them more soluble." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000040 name: protein-DNA binding namespace: subfunction def: "Binds to DNA." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000041 name: protein-genomic RNA binding namespace: subfunction def: "Binds to genomic RNA." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000042 name: protein-lipid interaction namespace: subfunction def: "Located at the interface of the protein and its lipid partner." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000043 name: protein-mRNA binding namespace: subfunction def: "Binds to mRNA." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000044 name: protein-protein binding namespace: subfunction def: "Binds to the protein partner(s)." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000045 name: protein-rRNA binding namespace: subfunction def: "Binds to rRNA." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000046 name: protein-tRNA binding namespace: subfunction def: "Binds to tRNA." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000047 name: regulation of proteolysis in vivo namespace: subfunction def: "Directs protein lysis under physiological conditions within the cell." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000048 name: self-transport through channel namespace: subfunction def: "Allows movement of proteins through membrane channels." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000049 name: structural mortar namespace: subfunction def: "Ribosomal proteins that fill the gaps and cracks of rRNA." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000050 name: substrate/ligand binding namespace: subfunction def: "Binds to substrate(s) and/or ligand(s)." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000051 name: transactivation (transcriptional activation) namespace: subfunction def: "Mediates transcriptional activation." [DPO:curators] is_a: DPO:000003 ! subfunction [Term] id: DPO:000052 name: ordered state namespace: structural_basis_for_function def: "Function arises from the ordered state." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000053 name: disordered state namespace: structural_basis_for_function def: "Function arises from the disordered state." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000054 name: pre-molten globule state namespace: structural_basis_for_function def: "Function arises from the pre-molten globule state." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000055 name: molten globule state namespace: structural_basis_for_function def: "Function arises from the molten globule state." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000056 name: disorder to order transition namespace: structural_basis_for_function def: "Function arises via a disorder to order transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000057 name: pre-molten globule to order transition namespace: structural_basis_for_function def: "Function arises via a pre-molten globule to order transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000058 name: molten globule to order transition namespace: structural_basis_for_function def: "Function arises via a molten globule to order transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000059 name: order to disorder transition namespace: structural_basis_for_function def: "Function arises via an order to disorder transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000060 name: pre-molten globule to disorder transition namespace: structural_basis_for_function def: "Function arises via a pre-molten globule to disorder transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000061 name: molten globule to disorder transition namespace: structural_basis_for_function def: "Function arises via a molten globule to disorder transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000062 name: order to pre-molten globule transition namespace: structural_basis_for_function def: "Function arises via an order to pre-molten globule transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000063 name: disorder to pre-molten globule transition namespace: structural_basis_for_function def: "Function arises via a disorder to pre-molten globule transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000064 name: molten globule to pre-molten globule transition namespace: structural_basis_for_function def: "Function arises via a molten globule to pre-molten globule transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000065 name: order to molten globule transition namespace: structural_basis_for_function def: "Function arises via an order to molten globule transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000066 name: disorder to molten globule transition namespace: structural_basis_for_function def: "Function arises via a disorder to molten globule transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000067 name: pre-molten globule to molten globule transition namespace: structural_basis_for_function def: "Function arises via a pre-molten globule to molten globule transition." [DPO:curators] is_a: DPO:000004 ! structural_basis_for_function [Term] id: DPO:000068 name: aberrant mobility on SDS-PAGE gel namespace: detection_method def: "Aberrant mobility on SDS-PAGE gels is an indication that the protein under study is disordered. However, this is not a definitive method and should be treated as supporting evidence." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000069 name: analytical ultracentrifugation namespace: detection_method def: "This method is based on the visualization the behavior of a particle in real time during sedimentation, allowing extremely accurate determination of hydrodynamic and thermodynamic parameters, as well as estimation of the molecular weight of proteins. These can then be compared with the size of a globular protein of the same mass. It is also useful in monitoring changes in conformation of the proteins." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000070 name: dynamic light scattering namespace: detection_method def: "Passes a beam of light through a sample, and then measures the extent of the scattering. This provides information on the hydrodynamic radius of the protein, which is dependent upon the size and conformation of the protein." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000071 name: dynamic quenching namespace: detection_method def: "The use of chemical or physical means to depopulate the excited state without allowing fluorescence emission. It can provide information on the accessibility of internal chromophores (i.e. tryptophan, tyrosine, phenylalanine) to solvent, and thus describes the relative compactness and dynamics of a protein molecule." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000072 name: far-UV circular dichroism (CD) namespace: detection_method def: "Detects the presence or absence of ordered secondary structure and can be used to estimate the secondary structure content in a given protein. CD spectra of natively unfolded proteins, being measured in the far ultraviolet region, show a large negative peak around 200 nm, as well as a value near zero at 220 nm in partially or fully unstructured proteins. These values are distinct enough to distinguish them from ordered proteins." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000073 name: fluorescence anisotropy namespace: detection_method def: "Measurement of the difference between the fluorescent intensities of parallel and perpendicular polarization when compared to the initial, excitation polarization. These measurements can be done for internal chromophores (i.e. tryptophan, tyrosine, phenylalanine) as well as for external chromophores (covalently bound fluorescent labels or dyes). They can give information on speed of chromophore rotation within the molecule and thus provide information on the mobility and orientation of the protein." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000074 name: fluorescence resonance energy transfer namespace: detection_method def: "Monitors the irradiative transfer of energy between two chromophores. This is used to determine the distance between the two fluorescence labels. Conformational flexibility (and hence disorder) is observed as changes in this distance." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000075 name: fluorescent probe namespace: detection_method def: "A rigid structure of well-folded protein will not allow access of fluorescent probes (usually large hydrophobic molecules) into the folded core, but a molten globular structure will allow the probe to penetrate. Incorporation of the probe into the core alters the environment of the probe, which can be detected as changes in fluorescence." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000076 name: fourier transform infrared spectroscopy namespace: detection_method def: "Presents information on the vibrational movements of functional groups due to bond stretching, change of bond angles, and other types of motion. It can then be compared to experimental data obtained from defined secondary structures (such as alpha helices and beta sheets), and thus can identify secondary characteristics outside the realm of these ordered sets." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000077 name: gel filtration/size exclusion chromatography namespace: detection_method def: "Separates proteins on the basis of their molecular size and hydrodynamic volumes." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000078 name: high relative B-factor namespace: detection_method def: "Refers to the degree in which the electron density is spread out for individual atoms or groups of atoms within a sample. Displacement of atoms results in higher B-factors, which indicate higher relative disorder." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000079 name: hydrogen-deuterium Exchange namespace: detection_method def: "Monitors the exchange rate between deuterium in the solvent and hydrogen in the main chain amides. These rates are affected by hydrogen bonding, accessibility of the amides to the surface, and flexibility of the protein. Faster exchange rates indicate the more flexible (and potentially disordered) protein." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000080 name: immunochemistry namespace: detection_method def: "Immunochemical methods may also be applied toward the elucidation of protein disorder. Important to this discussion, the immunoglobulins obtained against a given protein may be specific for different levels of macromolecule: the primary structure, the secondary structure, or the tertiary structure. Thus, antibodies may be successfully used to study the structural state of a protein." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000081 name: infrared spectroscopy namespace: detection_method def: "Presents information on the vibrational movements of functional groups due to bond stretching, change of bond angles, and other types of motion. It can then be compared to experimental data obtained from defined secondary structures (such as alpha helices and beta sheets), and thus can identify secondary characteristics outside the realm of these ordered sets." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000082 name: insensitivity to pH extreme namespace: detection_method def: "Intrinsically unstructured proteins, typically with extended forms and often with high percentages of charged residues, do not undergo large-scale structural changes when subjected to changes in pH. Unlike intrinsically unfolded proteins, structured proteins typically contain large numbers of hydrophobic residues that upon exposure due to pH-induced loosening of the structure, promote aggregation and precipitation." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000083 name: intrinsic fluorescence namespace: detection_method def: "Three amino acids exhibit intrinsic fluorescence: tryptophan, tyrosine and phenylalanine (ranked here in order of decreasing quantum yield) with tryptophan being the most commonly used. Quenching of tyrosine fluorescence can be due to ionization, to proximity to amide or carboxyl groups, or to the energy transfer to tryptophan. Application of intrinsic fluorescence to the study of protein conformational analysis relies on the fact that the parameters of tryptophan emission (intensity and wavelength of maximal fluorescence) depend essentially on environmental factors, including solvent polarity, pH, and presence or absence of quenchers. For example, a completely solvated tryptophan residue (e.g., free tryptophan in water or tryptophan in an unfolded polypeptide chain) has a maximum fluorescence in the vicinity of 350 nm, but embedding in the nonpolar interior of a compact globular protein results in a characteristic blue shift." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000084 name: mass spectrometry-based high resolution hydrogen-deuterium exchange namespace: detection_method def: "Measures the hydrogen-deuterium exchange rate for a given protein, but does not require crystals (as in X-ray crystallography) and is not limited to protein size and sample concentration (as in NMR). These exchange rates are affected by hydrogen bonding, accessibility of the protein surface, and flexibility of the protein. A faster exchange rate indicates that the protein is less stable, more flexible and may be disordered." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000085 name: near-UV circular dichroism (CD) spectroscopy namespace: detection_method def: "Indications of protein tertiary structure can be obtained by assaying the solvent accessibility of one type of optically active chromophores in proteins (side groups of aromatic amino acid residues. CD spectra in the near ultraviolet region (250.350 nm), also called the aromatic region, reflect the symmetry of the environment of aromatic amino acid residues. A highly symmetrical environment indicates solvent accessibility. Protein denaturation (where the normally protected hydrophobic core of a globular protein becomes exposed to the solvent) can be monitored by changes in the near-UV CD spectrum." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000086 name: nuclear magnetic resonance (NMR) namespace: detection_method def: "Heteronuclear multidimensional NMR is an extremely powerful technique for three-dimensional structure determination of proteins in solution. Regions of high backbone flexibility have reduced chemical shift dispersion indicative of disorder. Spin relaxation and nuclear Overhauser effect measurements can provide information on the molecular dynamics of the disordered region. Recent advances have allowed the complete assignment of resonances for several unfolded proteins as well as some disordered fragments of some folded proteins." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000087 name: optical rotatory dispersion namespace: detection_method def: "Measures the optical dispersion caused by a protein, in which the wavelength of the light is varied. This takes advantage of the fact that right and left handed molecules cause different rotational effects on the polarized light. This can be used to determine the presence and amount of secondary structures, such as alpha helices." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000088 name: radio-labelled Activity Assay namespace: detection_method def: "Detection of enzymatic activity using radio-labelled proteins or substrates. Reaction products are separated on gels by electrophoresis, phosphor-imaged, then visualized and quantified using relevant computer software. Comparing activity of native vs. modified proteins can indicate protein function(s)." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000089 name: raman optical activity namespace: detection_method def: "Raman optical activity can be used to provide information on secondary structure. Raman optical activity provides a means to distinguish between dynamic (flexible chain) and static disorder (structured domain tethered by a hinge region)." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000090 name: raman spectroscopy namespace: detection_method def: "Raman spectroscopy can be used to measure secondary structure content in the same way that is used for FTIR. The Raman spectrum of an unfolded peptide or protein is distinct from that of other forms of secondary." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000091 name: rotory shadowing electron microscopy namespace: detection_method def: "In this technique, a protein sample is coated with a heavy metal, such as platinum. These metals block the electron beams used in TEM, and can reveal the shape of the protein. As the source of the metal lies at an angle to the sample surface, the thickness of the accumulated metal varies with the surface topography. By rotating the sample while coating with the metal, the 3D characteristics of the sample can be observed in high resolution." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000092 name: sensitivity to proteolysis namespace: detection_method def: "Unstructured proteins have increased proteolytic degradation rates in vitro due to their increased flexibility which allows unfettered access to the chain by proteases." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000093 name: small-angle neutron scattering namespace: detection_method def: "Neutrons are passed through an aqueous solution containing a protein sample, which causes a scattering effect. The results can then be used to obtain details on the size, shape, and orientation of the protein. Neutron scattering provides a means of measuring on scales much smaller than light scattering because of the smaller size of the neutron wavelengths." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000094 name: small-angle X-ray scattering namespace: detection_method def: "The degree of globularity, which reflects the presence or absence of a tightly packed core in a protein molecule, can be extracted from the analysis of SAXS data in the form of a Kratky plot, whose shape is sensitive to the conformational state of the scattering protein molecules. It has been shown that a scattering curve in the Kratky coordinates has a characteristic maximum for globular proteins in either their native or molten globule states (i.e., states with globular structure). However, if a protein is completely unfolded or in a premolten globule conformation (i.e., with no globular structure), such a maximum will be absent." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000095 name: static light scattering namespace: detection_method def: "This method is based on passing a beam of light through a sample, and then measuring the extent of the scattering at one specific scattering angle. This provides information on the hydrodynamic radius of the protein, which is dependent upon the size and conformation of the protein." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000096 name: thermal stability namespace: detection_method def: "Structured proteins are generally denatured by heat, whereas high temperatures might induce folding in disordered proteins. This induced folding is believed to be a result of increased hydrophobic interactions, which leads to a greater hydrophobic driving force for protein folding." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000097 name: viscometry namespace: detection_method def: "The viscosity of a sample, which is the degree to which it resists flow under an applied force, is affected by the molecular weight of a protein and its shape and conformation. By comparing the behavior of a protein to those of known structure and similar size, the relative disorder of a protein can be determined." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000098 name: X-ray crystallography namespace: detection_method def: "Missing electron density of backbone atoms found in three-dimensional structures determined by X-ray crystallography can indicate disordered regions. The increased flexibility of atoms in such regions leads to noncoherent X-ray scattering, preventing them from being observed." [DPO:curators] is_a: DPO:000005 ! detection_method [Term] id: DPO:000099 name: 60S acidic ribosomal protein P1-B region 1 namespace: region def: "." [DPO:curators, PMID:15182941] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000100 name: 60S acidic ribosomal protein P2-beta region 1 namespace: region def: "." [DPO:curators, PMID:9236009, PMID:10913306] is_a: DPO:000010 ! disordered - molten globule region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000058 ! molten globule to order transition [Term] id: DPO:000101 name: early E2A DNA-binding protein region 1 namespace: region def: "." [DPO:curators, PMID:9545375, PMID:8039495, PMID:4040872] comment: This region is known as the flexible loop. It goes from disordered to ordered upon binding to DNA, helps to stabilize the binding complex and plays an important role in DNA replication. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000025 ! DNA unwinding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000102 name: early E2A DNA-binding protein region 2 namespace: region def: "." [DPO:curators, PMID:9545375, PMID:8039495, PMID:4040872] comment: This region is part of the C-terminal portion of the protein which is important in chain formation and DNA replication. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000103 name: early E2A DNA-binding protein region 3 namespace: region def: "." [DPO:curators, PMID:9545375, PMID:8039495, PMID:4040872] comment: This region is part of the C-terminal portion of the protein which is important for chain formation and DNA replication. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000104 name: early E2A DNA-binding protein region 4 namespace: region def: "." [DPO:curators, PMID:8039495, PMID:9545375, PMID:4040872] is_a: DPO:000006 ! ordered region [Term] id: DPO:000105 name: early E2A DNA-binding protein region 5 namespace: region def: "." [DPO:curators, PMID:9545375, PMID:8039495, PMID:4040872] is_a: DPO:000006 ! ordered region [Term] id: DPO:000106 name: early E2A DNA-binding protein region 6 namespace: region def: "." [DPO:curators, PMID:9545375, PMID:8039495, PMID:4040872] is_a: DPO:000006 ! ordered region [Term] id: DPO:000107 name: early E2A DNA-binding protein region 7 namespace: region def: "." [DPO:curators, PMID:9545375, PMID:8039495, PMID:4040872] is_a: DPO:000006 ! ordered region [Term] id: DPO:000108 name: cathelicidin antimicrobial peptide region 1 namespace: region def: "." [DPO:curators, PMID:9452503] comment: The disordered region became significantly more disordered below pH 5. At pH of 2, it was completely disordered. At pH of 13, it adopted a helical structure. is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000109 name: antitermination protein N region 1 namespace: region def: "." [DPO:curators, PMID:9659923] is_a: DPO:000007 ! disordered region [Term] id: DPO:000110 name: cytochrome c region 1 namespace: region def: "." [DPO:curators, PMID:4344990] is_a: DPO:000007 ! disordered region [Term] id: DPO:000111 name: DNA-(apurinic or apyrimidinic site) lyase region 1 namespace: region def: "." [DPO:curators, PMID:11286553] comment: This structure is refered to as 'form II' in Beernink (2001). is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000004127 ! DNA-(apurinic or apyrimidinic site) lyase relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function [Term] id: DPO:000112 name: DNA-(apurinic or apyrimidinic site) lyase region 2 namespace: region def: "." [DPO:curators, PMID:9351835] comment: This structure is refered to as 'form I' in Beernink (2001). The experimental sequence did not contain the N-terminal residues 1-35. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000004127 ! DNA-(apurinic or apyrimidinic site) lyase relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function [Term] id: DPO:000113 name: DNA-(apurinic or apyrimidinic site) lyase region 3 namespace: region def: "." [DPO:curators, PMID:11286553] comment: This structure is refered to as 'form II' in Beernink (2001). is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000004127 ! DNA-(apurinic or apyrimidinic site) lyase [Term] id: DPO:000114 name: DNA-(apurinic or apyrimidinic site) lyase region 4 namespace: region def: "." [DPO:curators, PMID:11286553] comment: This structure is refered to as 'form II' in Beernink (2001). is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000004127 ! DNA-(apurinic or apyrimidinic site) lyase [Term] id: DPO:000115 name: DNA-(apurinic or apyrimidinic site) lyase region 5 namespace: region def: "." [DPO:curators, PMID:11286553] comment: This structure is refered to as 'form I' in Beernink (2001). The experimental sequence did not contain the N-terminal residues 1-35. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004127 ! DNA-(apurinic or apyrimidinic site) lyase [Term] id: DPO:000116 name: DNA-(apurinic or apyrimidinic site) lyase region 6 namespace: region def: "." [DPO:curators, PMID:9351835] comment: This region is not essential for function (Gorman 1997). This structure is refered to as 'form III' in Beernink (2001) is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000004127 ! DNA-(apurinic or apyrimidinic site) lyase relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function [Term] id: DPO:000117 name: POU domain class 2-associating factor 1 region 1 namespace: region def: "." [DPO:curators, PMID:10329190] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013034 ! POU domain class 2-associating factor 1 [Term] id: DPO:000118 name: transcription initiation factor IIA small subunit region 1 namespace: region def: "." [DPO:curators, PMID:8610010] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000119 name: sulfotransferase 1A3/1A4 region 1 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 relationship: has_function DPO:000013 ! metal sponge relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000120 name: sulfotransferase 1A3/1A4 region 2 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000121 name: sulfotransferase 1A3/1A4 region 3 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000122 name: sulfotransferase 1A3/1A4 region 4 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000123 name: sulfotransferase 1A3/1A4 region 5 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000124 name: sulfotransferase 1A3/1A4 region 6 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000125 name: sulfotransferase 1A3/1A4 region 7 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 [Term] id: DPO:000126 name: sulfotransferase 1A3/1A4 region 8 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 [Term] id: DPO:000127 name: sulfotransferase 1A3/1A4 region 9 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 [Term] id: DPO:000128 name: sulfotransferase 1A3/1A4 region 10 namespace: region def: "." [DPO:curators, PMID:10543947] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000015820 ! sulfotransferase 1A3/1A4 [Term] id: DPO:000129 name: cystic fibrosis transmembrane conductance regulator region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001044 ! cystic fibrosis transmembrane conductance regulator (cftr) [Term] id: DPO:000130 name: choriogonadotropin subunit beta region 1 namespace: region def: "." [DPO:curators, PMID:8202136] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005391 ! choriogonadotropin subunit beta [Term] id: DPO:000131 name: clusterin region 1 namespace: region def: "." [DPO:curators, PMID:11570883] comment: This protein has been determined disordered based on numerous experimental results that indicate it contains flexible loops. However, no exact amino acid locations of disorder are known and the domains specified were based on PONDR predictions. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000039 ! protein detergent [Term] id: DPO:000132 name: clusterin region 2 namespace: region def: "." [DPO:curators, PMID:11570883] comment: This protein has been determined disordered based on numerous experimental results that indicate it contains flexible loops. However, no exact amino acid locations of disorder are known and the domains specified were based on PONDR predictions. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000039 ! protein detergent [Term] id: DPO:000133 name: clusterin region 3 namespace: region def: "." [DPO:curators, PMID:11570883] comment: This protein has been determined disordered based on numerous experimental results that indicate it contains flexible loops. However, no exact amino acid locations of disorder are known and the domains specified were based on PONDR predictions. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000039 ! protein detergent [Term] id: DPO:000134 name: cAMP-dependent protein kinase inhibitor alpha region 1 namespace: region def: "." [DPO:curators, PMID:1862343, PMID:2040607] is_a: DPO:000007 ! disordered region [Term] id: DPO:000135 name: cyclin-dependent kinase inhibitor 1 region 1 namespace: region def: "." [DPO:curators, PMID:8876165, PMID:9297835] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000005274 ! cyclin-dependent kinase inhibitor 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000136 name: cyclin-dependent kinase inhibitor 1C region 1 namespace: region def: "." [DPO:curators, PMID:9251023, PMID:11746698] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000005275 ! cyclin-dependent kinase inhibitor 1C relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000137 name: cyclin-dependent kinase inhibitor 1C region 2 namespace: region def: "." [DPO:curators, PMID:11746698, PMID:9251023] comment: This fragment had 90% inhibition activity towards A-CDK2. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000005275 ! cyclin-dependent kinase inhibitor 1C relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000138 name: cyclin-dependent kinase inhibitor 1B region 1 namespace: region def: "." [DPO:curators, PMID:15024385, PMID:8684460] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003090 ! cyclin-dependent kinase inhibitor 1B [Term] id: DPO:000139 name: cytochrome b-c1 complex subunit Rieske, mitochondrial region 1 namespace: region def: "." [DPO:curators, PMID:9651245] is_a: DPO:000007 ! disordered region [Term] id: DPO:000140 name: DNA-binding protein RAP1 region 1 namespace: region def: "." [DPO:curators, PMID:8620531] is_a: DPO:000007 ! disordered region [Term] id: DPO:000141 name: elongation factor G region 1 namespace: region def: "." [DPO:curators, PMID:11054294] is_a: DPO:000007 ! disordered region [Term] id: DPO:000142 name: elongation factor G region 2 namespace: region def: "." [DPO:curators, PMID:11054294] is_a: DPO:000007 ! disordered region [Term] id: DPO:000143 name: EMB-1 protein region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region [Term] id: DPO:000144 name: estradiol 17-beta-dehydrogenase 1 region 1 namespace: region def: "." [DPO:curators, PMID:8756321, PMID:7663947, PMID:10625652, PMID:9927655] comment: The 3DHE:A PDB file gives this protein fragment as complexed with Dehydroepiandrosterone. The 1DHT:A PDB file gives this protein fragment as complexed with Dihydrotestosterone. The 1IOL PDB file gives this protein fragment as complexed with Estradiol. The 1BHS PDB file gives the amino acid sequence for the uncomplexed, unmutated crystal structure of this protein. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 [Term] id: DPO:000145 name: estradiol 17-beta-dehydrogenase 1 region 2 namespace: region def: "." [DPO:curators, PMID:8756321] comment: The 1IOL PDB file gives this protein fragment as complexed with Estradiol. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000146 name: estradiol 17-beta-dehydrogenase 1 region 3 namespace: region def: "." [DPO:curators, PMID:8805577] comment: The 1FDT PDB gives this protein fragment as complexed with 17-Beta-Estradiol and NADP+ at low temperature, 123 K. The 1FDS PDB file gives this protein fragment as complexed with 17-Beta-Estradiol at room temperature. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000147 name: estradiol 17-beta-dehydrogenase 1 region 4 namespace: region def: "." [DPO:curators, PMID:8805577] comment: The 1FDT PDB gives this protein fragment as complexed with 17-Beta-Estradiol and NADP+ at low temperature, 123 K. The 1FDS PDB file gives this protein fragment as complexed with 17-Beta-Estradiol at room temperature. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000148 name: estradiol 17-beta-dehydrogenase 1 region 5 namespace: region def: "." [DPO:curators, PMID:8805577, PMID:12490543, PMID:12223444, PMID:9525918] comment: The 1I5R:A PDB file gives this protein as complexed with an 8-methylene-based inhibitor- an EM-1745 complex. The 1JTV:A PDB file gives this protein fragment as complexed with testosterone. The 1FDW PDB file gives this protein fragment as complexed with Estradiol and has the mutation H221Q. The 1FDT PDB file gives this protein fragment as complexed with 17-Beta-Estradiol and NADP+ at low temperature, 123 K. The experimental sequence used for PDB ID 1FDV contained a H221L substitution. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000042 ! protein-lipid interaction [Term] id: DPO:000149 name: estradiol 17-beta-dehydrogenase 1 region 6 namespace: region def: "." [DPO:curators, PMID:8805577] comment: The 1FDT PDB gives this protein fragment as complexed with 17-Beta-Estradiol and NADP+ at low temperature, 123 K. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000042 ! protein-lipid interaction [Term] id: DPO:000150 name: estradiol 17-beta-dehydrogenase 1 region 7 namespace: region def: "." [DPO:curators, PMID:8805577] comment: The 1FDT PDB gives this protein fragment as complexed with 17-Beta-Estradiol and NADP+ at low temperature, 123 K. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000042 ! protein-lipid interaction [Term] id: DPO:000151 name: estradiol 17-beta-dehydrogenase 1 region 8 namespace: region def: "." [DPO:curators, PMID:8805577] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000152 name: estradiol 17-beta-dehydrogenase 1 region 9 namespace: region def: "." [DPO:curators, PMID:8805577] comment: The 1FDT PDB gives this protein fragment as complexed with 17-Beta-Estradiol and NADP+ at low temperature, 123 K. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000153 name: estradiol 17-beta-dehydrogenase 1 region 10 namespace: region def: "." [DPO:curators, PMID:9525918] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000154 name: estradiol 17-beta-dehydrogenase 1 region 11 namespace: region def: "." [DPO:curators, PMID:9525918] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000155 name: estradiol 17-beta-dehydrogenase 1 region 12 namespace: region def: "." [DPO:curators, PMID:9525918] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000156 name: estradiol 17-beta-dehydrogenase 1 region 13 namespace: region def: "." [DPO:curators, PMID:9525918] comment: The experimental sequence used for PDB ID 1FDV contained a H221L substitution. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000157 name: estradiol 17-beta-dehydrogenase 1 region 14 namespace: region def: "." [DPO:curators, PMID:9525918] comment: The experimental sequence used for PDB ID 1FDV contained a H221L substitution. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000158 name: estradiol 17-beta-dehydrogenase 1 region 15 namespace: region def: "." [DPO:curators, PMID:9525918] comment: The sequence used for PDB ID 1FDW contained a H221Q substitution. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000159 name: estradiol 17-beta-dehydrogenase 1 region 16 namespace: region def: "." [DPO:curators, PMID:9525918] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000042 ! protein-lipid interaction [Term] id: DPO:000160 name: estradiol 17-beta-dehydrogenase 1 region 17 namespace: region def: "." [DPO:curators, PMID:9927655] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000161 name: estradiol 17-beta-dehydrogenase 1 region 18 namespace: region def: "." [DPO:curators, PMID:10625652] comment: The 3DHE PDB file gives this protein fragment as complexed with Dehydroepiandrosterone. The 1DHT PDB file gives this protein fragment as complexed with Dihydrotestosterone. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000162 name: estradiol 17-beta-dehydrogenase 1 region 19 namespace: region def: "." [DPO:curators, PMID:12490543] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008773 ! estradiol 17-beta-dehydrogenase 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000163 name: protein E7 region 1 namespace: region def: "." [DPO:curators, PMID:8245034] is_a: DPO:000007 ! disordered region [Term] id: DPO:000164 name: fibronectin-binding protein A region 1 namespace: region def: "." [DPO:curators, PMID:9398523] is_a: DPO:000007 ! disordered region [Term] id: DPO:000165 name: flagellin region 1 namespace: region def: "." [DPO:curators, PMID:2810365] is_a: DPO:000007 ! disordered region [Term] id: DPO:000166 name: flagellin region 2 namespace: region def: "." [DPO:curators, PMID:2810365] is_a: DPO:000007 ! disordered region [Term] id: DPO:000167 name: negative regulator of flagellin synthesis region 1 namespace: region def: "." [DPO:curators, PMID:9095196] is_a: DPO:000007 ! disordered region [Term] id: DPO:000168 name: eukaryotic translation initiation factor 4E-binding protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:9684899] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000006994 ! eukaryotic translation initiation factor 4E-binding protein 1 [Term] id: DPO:000169 name: glial cell line-derived neurotrophic factor region 1 namespace: region def: "." [DPO:curators, PMID:9187648, PMID:10545102] comment: The first identifiable residue in 1AGQ was ASN 115 in chain A, LYS 114 in chain B, GLY 117 in chain C, and GLY 117 in chain D. This supports claims in the Eigenbrot paper about dependency on the monomer. The experimental protein consisted of residues 78 - 211 of SwissProt entry Q07731. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000170 name: glial cell line-derived neurotrophic factor region 2 namespace: region def: "." [DPO:curators, PMID:10545102] comment: This sequence is part of a flexible loop that connects the alpha helix region to the second finger region of the protein. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000171 name: glial cell line-derived neurotrophic factor region 3 namespace: region def: "." [DPO:curators, PMID:9187648] is_a: DPO:000006 ! ordered region [Term] id: DPO:000172 name: glial cell line-derived neurotrophic factor region 4 namespace: region def: "." [DPO:curators, PMID:9187648] is_a: DPO:000006 ! ordered region [Term] id: DPO:000173 name: glucocorticoid receptor region 1 namespace: region def: "." [DPO:curators, PMID:10196139, PMID:7878043, PMID:12902338] comment: The 58 residue Tau1 core region of the disordered polypeptide from 187-244 retains 60-70% of the activity of the domain. The disordered region is devoid of structure at neutral pH in aqueous solution. The ligand-binding domain becomes notably more structured in the presence of triflouroethanol (TFE). TFE creates a more non-polar environment and favors secondary structure formation. The propensity towards alpha-helicial structure may be an important step in Tau1-mediated gene activation is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000011406 ! glucocorticoid receptor relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000034 ! metal binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000174 name: glucocorticoid receptor region 2 namespace: region def: "." [DPO:curators, PMID:10196139] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011406 ! glucocorticoid receptor relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000175 name: glycine N-methyltransferase region 1 namespace: region def: "." [DPO:curators, PMID:10756111] is_a: DPO:000007 ! disordered region [Term] id: DPO:000176 name: glycyl-tRNA synthetase region 1 namespace: region def: "." [DPO:curators, PMID:10064708, PMID:7556056] comment: The PDB chains 1B76 A and B have the disordered region spanning residues 96-158. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000046 ! protein-tRNA binding [Term] id: DPO:000177 name: growth hormone receptor region 1 namespace: region def: "." [DPO:curators, PMID:9571026] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000178 name: growth hormone receptor region 2 namespace: region def: "." [DPO:curators, PMID:9571026] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000179 name: growth hormone receptor region 3 namespace: region def: "." [DPO:curators, PMID:9571026] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000180 name: growth hormone receptor region 4 namespace: region def: "." [DPO:curators, PMID:9571026] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000181 name: growth hormone receptor region 5 namespace: region def: "." [DPO:curators, PMID:9571026, PMID:1549776] comment: Residues 222-226 had poor electron density and were not modeled in the crystal structure (Clackson, 1998). is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000182 name: growth hormone receptor region 6 namespace: region def: "." [DPO:curators, PMID:9571026, PMID:1549776] comment: The binding proteins of the 1:2 (hormone:binding protein) complex are hGHbp I and hGHbp II. De Vos found this region to be disordered in hGHbp I (de Vos 1992). is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000183 name: growth hormone receptor region 7 namespace: region def: "." [DPO:curators, PMID:8943276] comment: The N-terminus region of the hGHbp, for both the native 1:2 complex and the mutated 1:1 complex, had missing electron density for the first 31 residues (Sundstrom, 1996). is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000184 name: growth hormone receptor region 8 namespace: region def: "." [DPO:curators, PMID:8943276] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000185 name: growth hormone receptor region 9 namespace: region def: "." [DPO:curators, PMID:8943276] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000186 name: growth hormone receptor region 10 namespace: region def: "." [DPO:curators, PMID:8943276] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000187 name: growth hormone receptor region 11 namespace: region def: "." [DPO:curators, PMID:9571026] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000188 name: growth hormone receptor region 12 namespace: region def: "." [DPO:curators, PMID:9571026] comment: This region is likely stabilized upon binding of the second receptor to the growth hormone in the 1:2 complex (Clackson, 1998). is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000189 name: growth hormone receptor region 13 namespace: region def: "." [DPO:curators, PMID:1549776] comment: The binding proteins of the 1:2 (hormone:binding protein) complex are hGHbp I and hGHbp II. De Vos found this region to be disordered in hGHbp II (de Vos 1992). is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000190 name: growth hormone receptor region 14 namespace: region def: "." [DPO:curators, PMID:1549776] comment: The binding proteins of the 1:2 (hormone:binding protein) complex are hGHbp I and hGHbp II. De Vos found this region to be disordered in hGHbp II (de Vos 1992). is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000191 name: growth hormone receptor region 15 namespace: region def: "." [DPO:curators, PMID:1549776] comment: In the de Vos reference, (de Vos_Science_255_306-312), they refer to both of the binding proteins of the 1:2 (hormone:binding proteins) complex. They are named hGHbp I and hGHbp II. De Vos found this region to be disordered in the hGHbp II. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000192 name: growth hormone receptor region 16 namespace: region def: "." [DPO:curators, PMID:1549776] comment: In the de Vos reference, (de Vos_Science_255_306-312), they refer to both of the binding proteins of the 1:2 (hormone:binding proteins) complex. They are named hGHbp I and hGHbp II. De Vos found this region to be disordered in the hGHbp I. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000193 name: growth hormone receptor region 17 namespace: region def: "." [DPO:curators, PMID:1549776] comment: The binding proteins of the 1:2 (hormone:binding protein) complex are hGHbp I and hGHbp II. De Vos found this region to be disordered in hGHbp I (de Vos 1992). is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000194 name: growth hormone receptor region 18 namespace: region def: "." [DPO:curators, PMID:1549776] comment: The binding proteins of the 1:2 (hormone:binding protein) complex are hGHbp I and hGHbp II. De Vos found this region to be disordered in hGHbp I (de Vos 1992). is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000195 name: attachment protein G3P region 1 namespace: region def: "." [DPO:curators, PMID:10329170, PMID:10756036] is_a: DPO:000007 ! disordered region [Term] id: DPO:000196 name: guanine nucleotide-binding protein G(i), alpha-1 subunit region 1 namespace: region def: "." [DPO:curators, PMID:8073283] is_a: DPO:000007 ! disordered region [Term] id: DPO:000197 name: heat shock factor protein region 1 namespace: region def: "." [DPO:curators, PMID:8745404] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000198 name: heat shock factor protein region 2 namespace: region def: "." [DPO:curators, PMID:7849597] comment: The fragment used for solution structure determination was the DNA-binding domain.(aa194-aa282) is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) [Term] id: DPO:000199 name: heat shock factor protein region 3 namespace: region def: "." [DPO:curators, PMID:7849597] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000040 ! protein-DNA binding [Term] id: DPO:000200 name: heat shock factor protein region 4 namespace: region def: "." [DPO:curators, PMID:8284672] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000040 ! protein-DNA binding [Term] id: DPO:000201 name: probable peroxiredoxin region 1 namespace: region def: "." [DPO:curators, PMID:16214169] is_a: DPO:000007 ! disordered region [Term] id: DPO:000202 name: probable peroxiredoxin region 2 namespace: region def: "." [DPO:curators, PMID:16214169] is_a: DPO:000007 ! disordered region [Term] id: DPO:000203 name: probable peroxiredoxin region 3 namespace: region def: "." [DPO:curators, PMID:16214169] is_a: DPO:000007 ! disordered region [Term] id: DPO:000204 name: probable peroxiredoxin region 4 namespace: region def: "." [DPO:curators, PMID:16214169] is_a: DPO:000007 ! disordered region [Term] id: DPO:000205 name: probable peroxiredoxin region 5 namespace: region def: "." [DPO:curators, PMID:16214169] is_a: DPO:000007 ! disordered region [Term] id: DPO:000206 name: non-histone chromosomal protein HMG-14 region 1 namespace: region def: "." [DPO:curators, PMID:6273163] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000018 ! acetylation relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000207 name: non-histone chromosomal protein HMG-17 region 1 namespace: region def: "." [DPO:curators, PMID:565710] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008640 ! non-histone chromosomal protein HMG-17 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000018 ! acetylation relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000208 name: high mobility group protein HMG-I/HMG-Y region 1 namespace: region def: "." [DPO:curators, PMID:7559428, PMID:10372360, PMID:11498590, PMID:11593421] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008628 ! high mobility group protein HMG-I/HMG-Y relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000209 name: high mobility group-T protein region 1 namespace: region def: "." [DPO:curators, PMID:6273163] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000210 name: non-histone chromosomal protein H6 region 1 namespace: region def: "." [DPO:curators, PMID:6273163] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000211 name: protein tonB region 1 namespace: region def: "." [DPO:curators, PMID:15644214] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000024083 ! protein tonB relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000212 name: histone H5 region 1 namespace: region def: "." [DPO:curators, PMID:2181148] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000213 name: histone H5 region 2 namespace: region def: "." [DPO:curators, PMID:2181148] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000214 name: histone H5 region 3 namespace: region def: "." [DPO:curators, PMID:2181148] is_a: DPO:000006 ! ordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000215 name: hypoxanthine-guanine phosphoribosyltransferase region 1 namespace: region def: "." [DPO:curators, PMID:9790669] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000216 name: hypoxanthine-guanine phosphoribosyltransferase region 2 namespace: region def: "." [DPO:curators, PMID:9790669] is_a: DPO:000006 ! ordered region [Term] id: DPO:000217 name: lymphoid enhancer-binding factor 1 region 1 namespace: region def: "." [DPO:curators, PMID:7651541] is_a: DPO:000008 ! disordered - extended region relationship: has_subfunction DPO:000024 ! DNA bending relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000218 name: myelin basic protein region 1 namespace: region def: "." [DPO:curators, PMID:10394626] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000042 ! protein-lipid interaction relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000219 name: protein Nef region 1 namespace: region def: "." [DPO:curators, PMID:9351809] comment: This region was disordered according to the PDB files. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000047 ! regulation of proteolysis in vivo relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000042 ! protein-lipid interaction relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000030 ! fatty acylation (myristolation and palmitoylation) relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000220 name: protein Nef region 2 namespace: region def: "." [DPO:curators, PMID:9351809] comment: This region was disordered according to the PDB files. is_a: DPO:000008 ! disordered - extended region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000221 name: protein Nef region 3 namespace: region def: "." [DPO:curators, PMID:9351809] comment: This region was disordered according to the PDB files. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000222 name: protein Nef region 4 namespace: region def: "." [DPO:curators, PMID:11406408] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000047 ! regulation of proteolysis in vivo relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000042 ! protein-lipid interaction relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000030 ! fatty acylation (myristolation and palmitoylation) relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000223 name: protein Nef region 5 namespace: region def: "." [DPO:curators, PMID:11406408] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000224 name: protein Nef region 6 namespace: region def: "." [DPO:curators, PMID:11406408] is_a: DPO:000006 ! ordered region [Term] id: DPO:000225 name: protein Nef region 7 namespace: region def: "." [DPO:curators, PMID:11406408] is_a: DPO:000006 ! ordered region [Term] id: DPO:000226 name: myelin transcription factor 1-like protein region 1 namespace: region def: "." [DPO:curators, PMID:10606515] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000227 name: neurofilament heavy polypeptide region 1 namespace: region def: "." [DPO:curators, PMID:3220257, PMID:9424114, PMID:9714161] comment: According to Brown (1997), the disordered region is a portion of the C-terminus. However, the exact numbered amino acids are not documented in the literature. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011118 ! neurofilament heavy polypeptide [Term] id: DPO:000228 name: ornithine decarboxylase region 1 namespace: region def: "." [DPO:curators, PMID:10563800] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000229 name: ornithine decarboxylase region 2 namespace: region def: "." [DPO:curators, PMID:10563800] comment: PDB 1QU4 contains an A69K substitution is_a: DPO:000007 ! disordered region [Term] id: DPO:000230 name: ornithine decarboxylase region 3 namespace: region def: "." [DPO:curators, PMID:10563800] comment: PDB 1QU4 contains an A69K substitution is_a: DPO:000007 ! disordered region [Term] id: DPO:000231 name: ornithine decarboxylase region 4 namespace: region def: "." [DPO:curators, PMID:10563800] is_a: DPO:000007 ! disordered region [Term] id: DPO:000232 name: ornithine decarboxylase region 5 namespace: region def: "." [DPO:curators, PMID:10985770] is_a: DPO:000007 ! disordered region [Term] id: DPO:000233 name: ornithine decarboxylase region 6 namespace: region def: "." [DPO:curators, PMID:10985770] is_a: DPO:000007 ! disordered region [Term] id: DPO:000234 name: ornithine decarboxylase region 7 namespace: region def: "." [DPO:curators, PMID:10985770] comment: PDB entry 1F3T contains an A69K substitution is_a: DPO:000007 ! disordered region [Term] id: DPO:000235 name: ornithine decarboxylase region 8 namespace: region def: "." [DPO:curators, PMID:10985770] is_a: DPO:000007 ! disordered region [Term] id: DPO:000236 name: SPARC region 1 namespace: region def: "." [DPO:curators, PMID:3427055] comment: Two calcium binding domains are known but more may exist. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000015475 ! SPARC relationship: has_structural_basis_for_function DPO:000063 ! disorder to pre-molten globule transition [Term] id: DPO:000237 name: phenylalanyl-tRNA synthetase alpha chain region 1 namespace: region def: "." [DPO:curators, PMID:9016717, PMID:7664121] is_a: DPO:000007 ! disordered region [Term] id: DPO:000238 name: phosphatidylinositol-4-phosphate 5-kinase type II beta region 1 namespace: region def: "." [DPO:curators, PMID:9753329] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000012742 ! phosphatidylinositol-5-phosphate 4-kinase type-2 beta [Term] id: DPO:000239 name: phosphatidylinositol-4-phosphate 5-kinase type II beta region 2 namespace: region def: "." [DPO:curators, PMID:9753329] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000012742 ! phosphatidylinositol-5-phosphate 4-kinase type-2 beta relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000240 name: phosphatidylinositol-4-phosphate 5-kinase type II beta region 3 namespace: region def: "." [DPO:curators, PMID:9753329] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012742 ! phosphatidylinositol-5-phosphate 4-kinase type-2 beta [Term] id: DPO:000241 name: phosphatidylinositol-4-phosphate 5-kinase type II beta region 4 namespace: region def: "." [DPO:curators, PMID:9753329] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012742 ! phosphatidylinositol-5-phosphate 4-kinase type-2 beta [Term] id: DPO:000242 name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 region 1 namespace: region def: "." [DPO:curators, PMID:8602259, PMID:8784353] is_a: DPO:000007 ! disordered region [Term] id: DPO:000243 name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 region 2 namespace: region def: "." [DPO:curators, PMID:8784353] is_a: DPO:000007 ! disordered region [Term] id: DPO:000244 name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 region 3 namespace: region def: "." [DPO:curators, PMID:8784353] is_a: DPO:000007 ! disordered region [Term] id: DPO:000245 name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 region 4 namespace: region def: "." [DPO:curators, PMID:8784353] is_a: DPO:000007 ! disordered region [Term] id: DPO:000246 name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 region 5 namespace: region def: "." [DPO:curators, PMID:8602259] is_a: DPO:000007 ! disordered region [Term] id: DPO:000247 name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 region 6 namespace: region def: "." [DPO:curators, PMID:8602259] is_a: DPO:000007 ! disordered region [Term] id: DPO:000248 name: 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase delta-1 region 7 namespace: region def: "." [DPO:curators, PMID:8784353] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000249 name: sperm histone region 1 namespace: region def: "." [DPO:curators, PMID:2243113, PMID:2738040] is_a: DPO:000007 ! disordered region [Term] id: DPO:000250 name: prothymosin alpha region 1 namespace: region def: "." [DPO:curators, PMID:7548085] is_a: DPO:000007 ! disordered region [Term] id: DPO:000251 name: modification methylase PvuII region 1 namespace: region def: "." [DPO:curators, PMID:9207015] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000035 ! methylation [Term] id: DPO:000252 name: modification methylase PvuII region 2 namespace: region def: "." [DPO:curators, PMID:9207015] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000035 ! methylation relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000253 name: replication protein A 70 kDa DNA-binding subunit region 1 namespace: region def: "." [DPO:curators, PMID:10526407] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000014170 ! replication protein A 70 kDa DNA-binding subunit [Term] id: DPO:000254 name: retinoic acid receptor RXR-alpha region 1 namespace: region def: "." [DPO:curators, PMID:9698548, PMID:9826495] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000014372 ! retinoic acid receptor RXR-alpha relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding [Term] id: DPO:000255 name: retinoic acid receptor RXR-alpha region 2 namespace: region def: "." [DPO:curators, PMID:9698548, PMID:9826495] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000014372 ! retinoic acid receptor RXR-alpha relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000256 name: retinoic acid receptor RXR-alpha region 3 namespace: region def: "." [DPO:curators, PMID:9698548, PMID:9826495] comment: This region contains the D-box as well as the second zinc binding domain and lies between the first and second helices. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000014372 ! retinoic acid receptor RXR-alpha relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000257 name: retinoic acid receptor RXR-alpha region 4 namespace: region def: "." [DPO:curators, PMID:9698548, PMID:9826495] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000014372 ! retinoic acid receptor RXR-alpha relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000258 name: retinoic acid receptor RXR-alpha region 5 namespace: region def: "." [DPO:curators, PMID:9698548, PMID:9826495] comment: The C-terminal helix undergoes an order to disorder transition upon binding to DNA. The unwinding of the helix most likely facilitates homodimer formation by maximizing interactions between the two DNA-bound RXR proteins. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000014372 ! retinoic acid receptor RXR-alpha relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:000259 name: regulator of G-protein signaling 4 region 1 namespace: region def: "." [DPO:curators, PMID:9108480] is_a: DPO:000007 ! disordered region [Term] id: DPO:000260 name: regulator of G-protein signaling 4 region 2 namespace: region def: "." [DPO:curators, PMID:9108480] is_a: DPO:000007 ! disordered region [Term] id: DPO:000261 name: capsid protein region 1 namespace: region def: "." [DPO:curators, PMID:6854633] comment: This region is disordered in all three subunits. is_a: DPO:000007 ! disordered region [Term] id: DPO:000262 name: capsid protein region 2 namespace: region def: "." [DPO:curators, PMID:6854633] comment: This region is disordered in both the A and B subunits. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000263 name: capsid protein region 3 namespace: region def: "." [DPO:curators, PMID:6854633] comment: This region is disordered in both the A and B subunits. is_a: DPO:000007 ! disordered region [Term] id: DPO:000264 name: capsid protein region 4 namespace: region def: "." [DPO:curators, PMID:6854633, PMID:6401119] comment: This region corresponds to the C subunit only. This region is part of the flexible arm that helps to determine binding specificity. is_a: DPO:000007 ! disordered region [Term] id: DPO:000265 name: capsid protein region 5 namespace: region def: "." [DPO:curators, PMID:6854633, PMID:6401119] comment: This region corresponds to the A subunit only. is_a: DPO:000007 ! disordered region [Term] id: DPO:000266 name: capsid protein region 6 namespace: region def: "." [DPO:curators, PMID:6854633, PMID:6401119] is_a: DPO:000007 ! disordered region [Term] id: DPO:000267 name: capsid protein region 7 namespace: region def: "." [DPO:curators, PMID:6854633, PMID:3681993] comment: This section is only ordered in the C subunit, and is important in stabilizing the capsid. is_a: DPO:000006 ! ordered region relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000268 name: capsid protein region 8 namespace: region def: "." [DPO:curators, PMID:6854633] comment: This region is only ordered in the C subunit. is_a: DPO:000006 ! ordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000269 name: capsid protein region 9 namespace: region def: "." [DPO:curators, PMID:6854633] comment: This region is only ordered in the C subunit. is_a: DPO:000006 ! ordered region relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000270 name: serine-aspartate repeat-containing protein D region 1 namespace: region def: "." [DPO:curators, PMID:9813018] is_a: DPO:000007 ! disordered region [Term] id: DPO:000271 name: structural polyprotein region 1 namespace: region def: "." [DPO:curators, PMID:1944569] is_a: DPO:000007 ! disordered region [Term] id: DPO:000272 name: small heat shock protein HSP16.5 region 1 namespace: region def: "." [DPO:curators, PMID:9707123] is_a: DPO:000007 ! disordered region [Term] id: DPO:000273 name: synaptosomal-associated protein 25 region 1 namespace: region def: "." [DPO:curators, PMID:9671503] comment: The sequence has 98% similarity to that of chicken and human SNAP-25 but there is no 100% match to any organism when Blasted. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000274 name: vesicle-associated membrane protein 2 region 1 namespace: region def: "." [DPO:curators, PMID:9346956] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000017249 ! vesicle-associated membrane protein 2 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000275 name: vesicle-associated membrane protein 2 region 2 namespace: region def: "." [DPO:curators, PMID:10481273] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000017249 ! vesicle-associated membrane protein 2 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000276 name: vesicle-associated membrane protein 2 region 3 namespace: region def: "." [DPO:curators, PMID:9852083] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000017249 ! vesicle-associated membrane protein 2 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000277 name: alpha-synuclein region 1 namespace: region def: "." [DPO:curators, PMID:8901511, PMID:11312271, PMID:11590151, PMID:11286556] comment: This region is composed of an N-terminal membrane anchoring region (residues 1 - 60), the central hydrophobic/amyloidogenic NAC region (residues 61-95), and a C-terminal acidic region (residues 96-140) that is inhibitory to amyloid formation. Amyloid formation may be the result of both phosphorylation of Ser129 and metal binding in the C-terminal region. When this occurs, residues 36 - 99 take on a cross-beta sheet structure characteristic of most amyloids, while the N- and C-termini remain statically and dynamically disordered, respectively. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000278 name: homeobox protein Nkx-2.1 region 1 namespace: region def: "." [DPO:curators, PMID:9425125] is_a: DPO:000007 ! disordered region [Term] id: DPO:000279 name: homeobox protein Nkx-2.1 region 2 namespace: region def: "." [DPO:curators, PMID:9425125] is_a: DPO:000007 ! disordered region [Term] id: DPO:000280 name: homeobox protein Nkx-2.1 region 3 namespace: region def: "." [DPO:curators, PMID:9425125] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000281 name: estrogen receptor [Isoform long] region 1 namespace: region def: "." [DPO:curators, PMID:11595744] comment: The fragment used consisted of residues 1-184. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000282 name: estrogen receptor [Isoform long] region 2 namespace: region def: "." [DPO:curators, PMID:16100953] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000283 name: estrogen receptor [Isoform long] region 3 namespace: region def: "." [DPO:curators, PMID:16100953] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000284 name: DNA topoisomerase 1 region 1 namespace: region def: "." [DPO:curators, PMID:8567649, PMID:10380229, PMID:8631793] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000036 ! nuclear localization relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000285 name: DNA topoisomerase 1 region 2 namespace: region def: "." [DPO:curators, PMID:8567649, PMID:9611241, PMID:10380229, PMID:8631793, PMID:8631794] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_subfunction DPO:000036 ! nuclear localization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000286 name: DNA topoisomerase 1 region 3 namespace: region def: "." [DPO:curators, PMID:8567649, PMID:14654701, PMID:14741206, PMID:11283003, PMID:9488644] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000287 name: DNA topoisomerase 1 region 4 namespace: region def: "." [DPO:curators, PMID:8567649, PMID:14654701, PMID:14741206, PMID:11283003, PMID:9488652] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000288 name: DNA topoisomerase 1 region 5 namespace: region def: "." [DPO:curators, PMID:9488652] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000289 name: DNA topoisomerase 1 region 6 namespace: region def: "." [DPO:curators, PMID:9488644] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000290 name: DNA topoisomerase 1 region 7 namespace: region def: "." [DPO:curators, PMID:10497031, PMID:9488652] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000291 name: DNA topoisomerase 1 region 8 namespace: region def: "." [DPO:curators, PMID:9488652] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000292 name: DNA topoisomerase 1 region 9 namespace: region def: "." [DPO:curators, PMID:9488644] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000293 name: DNA topoisomerase 1 region 10 namespace: region def: "." [DPO:curators, PMID:9488644] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000294 name: DNA topoisomerase 1 region 11 namespace: region def: "." [DPO:curators, PMID:9488652] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000295 name: DNA topoisomerase 1 region 12 namespace: region def: "." [DPO:curators, PMID:9488644] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000296 name: DNA topoisomerase 1 region 13 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000297 name: DNA topoisomerase 1 region 14 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000298 name: DNA topoisomerase 1 region 15 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000299 name: DNA topoisomerase 1 region 16 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000300 name: DNA topoisomerase 1 region 17 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000301 name: DNA topoisomerase 1 region 18 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000302 name: DNA topoisomerase 1 region 19 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000303 name: DNA topoisomerase 1 region 20 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000304 name: DNA topoisomerase 1 region 21 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000305 name: DNA topoisomerase 1 region 22 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000306 name: DNA topoisomerase 1 region 23 namespace: region def: "." [DPO:curators, PMID:10497031] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000307 name: DNA topoisomerase 1 region 24 namespace: region def: "." [DPO:curators, PMID:10497031] comment: The loop leading up to His632 (residues 626 - 632) is disordered in four out of five structures A-E. His632 may stabilize the transition state of the scissile phosphorus atom that was exposed through nucleophilic attack by an activated C4-oxygen atom of Tyr723. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016542 ! DNA topoisomerase 1 [Term] id: DPO:000308 name: DNA topoisomerase 2 region 1 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region [Term] id: DPO:000309 name: DNA topoisomerase 2 region 2 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region [Term] id: DPO:000310 name: DNA topoisomerase 2 region 3 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region [Term] id: DPO:000311 name: DNA topoisomerase 2 region 4 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region [Term] id: DPO:000312 name: DNA topoisomerase 2 region 5 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000313 name: DNA topoisomerase 2 region 6 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000314 name: DNA topoisomerase 2 region 7 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000315 name: DNA topoisomerase 2 region 8 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000316 name: DNA topoisomerase 2 region 9 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000317 name: DNA topoisomerase 2 region 10 namespace: region def: "." [DPO:curators, PMID:8538787] comment: DP00076 - The experimental fragment was composed of residues 410 - 1202. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000318 name: DNA topoisomerase 2 region 11 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000319 name: regulatory protein ADR1 region 1 namespace: region def: "." [DPO:curators, PMID:9642072, PMID:3515197] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000320 name: regulatory protein ADR1 region 2 namespace: region def: "." [DPO:curators, PMID:9642072, PMID:3515197] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000321 name: proto-oncogene protein c-fos region 1 namespace: region def: "." [DPO:curators, PMID:10704222, PMID:11749217] comment: Helical or beta-sheet structure is not induced in Fos-AD by changes in pH or ionic strength. Chemical shift data indicated that Fos-AD lacked the stable secondary or tertiary structure normally found with globular proteins. Fos-AD has a Stokes radius that is twice that of a compact globular protein (35 compared to 17) indicating that Fos-AD is unfolded, and sedimentation equilibrium indicated that Fos-AD is monomeric. Negative amide NOEs indicate that the main chain of Fos-AD is highly flexible and exists in a motional system expected for an unfolded protein. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000007597 ! proto-oncogene protein c-fos relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000322 name: estrogen receptor beta [Isoform 1 (Beta-1)] region 1 namespace: region def: "." [DPO:curators, PMID:11595744] comment: The fragment consisted of residues 1-103. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000323 name: cyclic AMP-responsive element-binding protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:9413984] comment: Upon binding to the KIX domain of the CREB binding protein this region remains disordered. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000324 name: cyclic AMP-responsive element-binding protein 1 region 2 namespace: region def: "." [DPO:curators, PMID:9413984, PMID:9688563] comment: Upon binding to the KIX domain of the CREB binding protein this region forms two alpha helices, alphaA and alphaB. The two fold into mutually perpendicular helices that run from Asp-120 to Ser-129 and Pro-132 to Asp-144, respectively. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000325 name: cyclic AMP-responsive element-binding protein 1 region 3 namespace: region def: "." [DPO:curators, PMID:9413984] comment: Upon binding to the KIX domain of the CREB binding protein this region remains unstructured. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000326 name: transcription initiation factor TFIID subunit 1 region 1 namespace: region def: "." [DPO:curators, PMID:9741622] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000327 name: eukaryotic initiation factor 4F subunit p150 region 1 namespace: region def: "." [DPO:curators, PMID:10409688] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000328 name: general control protein GCN4 region 1 namespace: region def: "." [DPO:curators, PMID:2145515] is_a: DPO:000007 ! disordered region [Term] id: DPO:000329 name: protein max [Isoform 2] region 1 namespace: region def: "." [DPO:curators, PMID:9399572, PMID:16171389] comment: The experimental sequence consisted of the first 110 residues of Max. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000330 name: protein max [Isoform 2] region 2 namespace: region def: "." [DPO:curators, PMID:16171389] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000331 name: transcription factor p65 region 1 namespace: region def: "." [DPO:curators, PMID:1935902, PMID:7929265] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013875 ! transcription factor p65 relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000332 name: transcription factor p65 region 2 namespace: region def: "." [DPO:curators, PMID:1935902, PMID:7929265] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013875 ! transcription factor p65 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000333 name: transcription factor p65 region 3 namespace: region def: "." [DPO:curators, PMID:7929265] comment: NMR analysis of a protein corresponding to the C-terminal 123 amino acids showed a random coil conformation, which indicates that the entire transactivating C-terminus is unstructured. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013875 ! transcription factor p65 relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000334 name: cellular tumor antigen p53 region 1 namespace: region def: "." [DPO:curators, PMID:7559631] comment: This disordered region was discovered in an engineered fragment containing residues 1-73. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000335 name: cellular tumor antigen p53 region 2 namespace: region def: "." [DPO:curators, PMID:8875929] comment: This disordered region was discovered in an engineered fragment containing residues 15-29. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000336 name: cellular tumor antigen p53 region 3 namespace: region def: "." [DPO:curators, PMID:8875929] comment: The protein studied was an engineered fragment containing residues 15-29. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000337 name: cellular tumor antigen p53 region 4 namespace: region def: "." [DPO:curators, PMID:12351827, PMID:12110597] comment: The disordered region characterized was studied in an engineered fragment containing residues 95-292. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 [Term] id: DPO:000338 name: cellular tumor antigen p53 region 5 namespace: region def: "." [DPO:curators, PMID:12351827, PMID:12110597] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 [Term] id: DPO:000339 name: cellular tumor antigen p53 region 6 namespace: region def: "." [DPO:curators, PMID:12351827, PMID:12110597] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 [Term] id: DPO:000340 name: cellular tumor antigen p53 region 7 namespace: region def: "." [DPO:curators, PMID:14534297] comment: The disordered region characterized was from an engineered fragment containing residues 94-312 and mutations at M133L, V203A, N239Y, N268D. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 [Term] id: DPO:000341 name: cellular tumor antigen p53 region 8 namespace: region def: "." [DPO:curators] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000342 name: cellular tumor antigen p53 region 9 namespace: region def: "." [DPO:curators] comment: This disordered region was located in an engineered fragment containing residues 319-360. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003035 ! cellular tumor antigen p53 relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000343 name: tegument protein VP16 region 1 namespace: region def: "." [DPO:curators, PMID:10398682] is_a: DPO:000007 ! disordered region [Term] id: DPO:000344 name: tegument protein VP16 region 2 namespace: region def: "." [DPO:curators, PMID:10398682] is_a: DPO:000007 ! disordered region [Term] id: DPO:000345 name: ubiquinol oxidase subunit 1 region 1 namespace: region def: "." [DPO:curators, PMID:11017202, PMID:2162835] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022369 ! ubiquinol oxidase subunit 1 [Term] id: DPO:000346 name: ubiquinol oxidase subunit 1 region 2 namespace: region def: "." [DPO:curators, PMID:11017202, PMID:2162835] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022369 ! ubiquinol oxidase subunit 1 [Term] id: DPO:000347 name: ubiquinol oxidase subunit 1 region 3 namespace: region def: "." [DPO:curators, PMID:11017202, PMID:2162835] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022369 ! ubiquinol oxidase subunit 1 [Term] id: DPO:000348 name: ubiquinol oxidase subunit 1 region 4 namespace: region def: "." [DPO:curators, PMID:11017202, PMID:2162835] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022369 ! ubiquinol oxidase subunit 1 [Term] id: DPO:000349 name: ubiquinol oxidase subunit 1 region 5 namespace: region def: "." [DPO:curators, PMID:11017202, PMID:2162835] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022369 ! ubiquinol oxidase subunit 1 [Term] id: DPO:000350 name: ubiquinol oxidase subunit 2 region 1 namespace: region def: "." [DPO:curators, PMID:11017202] comment: This region is located in the periplasmic space. Abramson et al. could not assign a sequence for residues 1-36 or 113-124. However the PDB file locates electron density for residues 27-283. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022368 ! ubiquinol oxidase subunit 2 [Term] id: DPO:000351 name: ubiquinol oxidase subunit 2 region 2 namespace: region def: "." [DPO:curators, PMID:11017202] comment: This region is located in the periplasmic space. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022368 ! ubiquinol oxidase subunit 2 [Term] id: DPO:000352 name: ubiquinol oxidase subunit 2 region 3 namespace: region def: "." [DPO:curators, PMID:1324168, PMID:8433374, PMID:8618822] comment: This region is located in the periplasmic space. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022368 ! ubiquinol oxidase subunit 2 [Term] id: DPO:000353 name: ubiquinol oxidase subunit 2 region 4 namespace: region def: "." [DPO:curators, PMID:1324168, PMID:8433374, PMID:8618822] comment: This region is located in the periplasmic space. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022368 ! ubiquinol oxidase subunit 2 [Term] id: DPO:000354 name: voltage-gated potassium channel subunit beta-1 [Isoform KvB1.1] region 1 namespace: region def: "." [DPO:curators, PMID:10585425] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000355 name: DNA repair protein complementing XP-A cells homolog region 1 namespace: region def: "." [DPO:curators, PMID:11344324] comment: The results from the laboratory experiments were compared to PONDR predictions and found to be identical. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000356 name: DNA repair protein complementing XP-A cells homolog region 2 namespace: region def: "." [DPO:curators, PMID:11344324] comment: The results from the laboratory experiments were compared to PONDR predictions and found to be identical. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000357 name: calcineurin subunit B type 1 region 1 namespace: region def: "." [DPO:curators, PMID:8524402, PMID:12357034, PMID:8524402] comment: Mass spectrometry combined with enzymatic digestion showed that the N-terminal residues were sensitive to proteolysis. (Jin and Harrison, 2002) is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013150 ! calcineurin subunit B type 1 [Term] id: DPO:000358 name: calcineurin subunit B type 1 region 2 namespace: region def: "." [DPO:curators, PMID:8524402, PMID:12357034] comment: The disordered region from 374-468 includes the CaM-binding domain predicted to lie between residues 390-414. As in the crystal structure of native CaN, the C-terminal portion of CaNA is disordered beyond the CaNB-binding helix (343-373), and electron density for the CaM-binding domain of CaNA is not visible. (Kissinger CR, et al.) Mass spectrometry combined with enzymatic digestion showed that the calmodulin-binding region was removed by trypsin, indicating that this disordered region is sensitive to proteolysis. Calmodulin binds to this disordered region between the CnB-binding site and the autoinhibitory helix, and this segment takes on an alpha-helical conformation to pull the AI helix away from the catalytic site in order to activate the phosphatase activity. (Jin and Harrison) Calmodulin is a protein that wraps around a target helix in calcineurin upon binding. The ~20-residue target helix is located within a 95-residue disordered region that is not observed in crystal structures. The disorder allows the target helix to separate from the rest of the protein, thus permitting access for binding. For the calmodulin/target helix interaction, it is unknown whether the other ~75 disordered residues become ordered upon binding, but it is thought that this region takes on an alpha-helical conformation when calmodulin binds (Jin and Harrison). The function of the disordered region is to make the helix accessible for calmodulin binding, and this region of disorder is essential to the regulation of calcineurin by calcium/calmodulin. Binding of calcium/calcineurin activates calcineurin's serine/threonine phosphatase activity. (Dunker et al., 2001) is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013150 ! calcineurin subunit B type 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000359 name: calcineurin subunit B type 1 region 3 namespace: region def: "." [DPO:curators, PMID:8524402] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013150 ! calcineurin subunit B type 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000360 name: calcineurin subunit B type 1 region 4 namespace: region def: "." [DPO:curators, PMID:8524402] comment: As in the crystal structure of native CaN, the C-terminal portion of CaNA is disordered beyond the CaNB-binding helix (343-373), which indicates that the autoinhibitory domain is disordered. However, this disordered region is present for PDB 1AUI. Unlike the native CaN crystal structure, the AI segment of CaN is not seen in the crystal structure of the FKBP12-FK506-CaN complex. This might indicate that the autoinhibitory complex is ordered when CaNA is in a complex with CaNB, but other evidence suggests that when the AI domain is either not in contact with the catalytic domain (as is the case with immunosuppressants) or when CaNA exists as a monomer, the AI domain may not be structured. Calmodulin binds to the disordered region between the CnB-binding site and the autoinhibitory helix, and this segment takes on an alpha-helical conformation to pull the AI helix away from the catalytic site in order to activate the phosphatase activity according to Jin and Harrison. When this occurs, the structure of the AI helix may change as well, leading to disorder. Further evidence needs to be found in order to indicate the state of the AI domain. For now, the AI domain will be considered disordered based on the statement made by Kissinger above and the information provided by Jin and Harrison in regards to proteolytic sensitivity. The autoinhibitory domain lies over the substrate-binding cleft in the catalytic domain and consists of two short alpha-helical regions plus five residues in an extended conformation. The helical regions restrict interaction with the substrate-binding cleft when the AI segment contacts the cleft. (Kissinger CR, et al.) Mass spectrometry combined with enzymatic digestion showed that the autoinhibitory helix was removed by trypsin, indicating that this disordered region is sensitive to proteolysis. (Jin and Harrison, 2002) is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013150 ! calcineurin subunit B type 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000361 name: calcineurin subunit B type 1 region 5 namespace: region def: "." [DPO:curators, PMID:8524402] comment: CaNA residues 487 - 521 are not visible in the electron density map of the crystal structure and are disordered. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013150 ! calcineurin subunit B type 1 [Term] id: DPO:000362 name: calcineurin subunit B type 1 region 6 namespace: region def: "." [DPO:curators, PMID:8524402] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000013150 ! calcineurin subunit B type 1 [Term] id: DPO:000363 name: tyrosine 3-monooxygenase region 1 namespace: region def: "." [DPO:curators, PMID:8104613] is_a: DPO:000007 ! disordered region [Term] id: DPO:000364 name: tyrosyl-tRNA synthetase region 1 namespace: region def: "." [DPO:curators, PMID:2504923, PMID:12005430] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000365 name: lipoate-protein ligase A subunit 1 region 1 namespace: region def: "." [DPO:curators, PMID:16384580] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000366 name: histone H1.0 region 1 namespace: region def: "." [DPO:curators, PMID:11584004] comment: The fragment used consisted of residues 1-20. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008405 ! histone H1.0 relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000367 name: histone H1.0 region 2 namespace: region def: "." [DPO:curators, PMID:11584004] comment: The fragment used consisted of residues 8-30. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008405 ! histone H1.0 relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000368 name: histone H1.0 region 3 namespace: region def: "." [DPO:curators, PMID:16006555] comment: The fragment used consisted of residues 96-193. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008405 ! histone H1.0 relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000369 name: histone H1.0 region 4 namespace: region def: "." [DPO:curators, PMID:10794405, PMID:11413144] comment: The fragment used consisted of residues 99-121. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008405 ! histone H1.0 relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000370 name: collagen adhesin region 1 namespace: region def: "." [DPO:curators, PMID:9334749, PMID:8218209] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000371 name: glycine amidinotransferase, mitochondrial region 1 namespace: region def: "." [DPO:curators, PMID:9218780, PMID:9165070] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000007865 ! glycine amidinotransferase, mitochondrial [Term] id: DPO:000372 name: ATP-dependent hsl protease ATP-binding subunit hslU region 1 namespace: region def: "." [DPO:curators, PMID:10693812] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022934 ! ATP-dependent hsl protease ATP-binding subunit hslU [Term] id: DPO:000373 name: **Gag polyprotein** region 2 namespace: region def: "." [DPO:curators, PMID:16234236] is_a: DPO:000007 ! disordered region [Term] id: DPO:000374 name: **Gag polyprotein** region 3 namespace: region def: "." [DPO:curators, PMID:16234236] is_a: DPO:000007 ! disordered region [Term] id: DPO:000375 name: myosin-11 region 1 namespace: region def: "." [DPO:curators, PMID:9741621] is_a: DPO:000007 ! disordered region [Term] id: DPO:000376 name: myosin-11 region 2 namespace: region def: "." [DPO:curators, PMID:9741621] is_a: DPO:000007 ! disordered region [Term] id: DPO:000377 name: myosin-11 region 3 namespace: region def: "." [DPO:curators, PMID:9147986] comment: The sequence information for this region came from Rovner et. al. (1997). It is a deviation from the Yanagisawa et. al sequence. This region is part of a 7 amino acid insert that helps to differentiate between fast and slow smooth muscle. The insert increases the proteins enzymatic capabilities, as well as its ability to bind and move actin filaments. is_a: DPO:000007 ! disordered region [Term] id: DPO:000378 name: myosin-11 region 4 namespace: region def: "." [DPO:curators, PMID:9741621] is_a: DPO:000007 ! disordered region [Term] id: DPO:000379 name: myosin-11 region 5 namespace: region def: "." [DPO:curators, PMID:9741621] is_a: DPO:000007 ! disordered region [Term] id: DPO:000380 name: myosin-11 region 6 namespace: region def: "." [DPO:curators, PMID:9741621] is_a: DPO:000007 ! disordered region [Term] id: DPO:000381 name: myosin-11 region 7 namespace: region def: "." [DPO:curators, PMID:9741621] comment: The PDB file 1BR2 shows the disordered region ending at amino acid PRO-548. is_a: DPO:000007 ! disordered region [Term] id: DPO:000382 name: myosin-11 region 8 namespace: region def: "." [DPO:curators, PMID:9741621] is_a: DPO:000007 ! disordered region [Term] id: DPO:000383 name: myosin-11 region 9 namespace: region def: "." [DPO:curators, PMID:9741621] is_a: DPO:000007 ! disordered region [Term] id: DPO:000384 name: myosin-11 region 10 namespace: region def: "." [DPO:curators, PMID:9741621] is_a: DPO:000007 ! disordered region [Term] id: DPO:000385 name: protein grpE region 1 namespace: region def: "." [DPO:curators, PMID:9103205] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022840 ! protein grpE [Term] id: DPO:000386 name: transcription initiation factor IIA large subunit region 1 namespace: region def: "." [DPO:curators, PMID:8610010] comment: The fragment used for structure determination consisted of the C-terminal 76 residues.(aa210-aa286) is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000387 name: diol dehydrase beta subunit region 1 namespace: region def: "." [DPO:curators, PMID:10467140] is_a: DPO:000007 ! disordered region [Term] id: DPO:000388 name: diol dehydrase gamma subunit region 1 namespace: region def: "." [DPO:curators, PMID:10467140] is_a: DPO:000007 ! disordered region [Term] id: DPO:000389 name: periplasmic [Fe] hydrogenase large subunit region 1 namespace: region def: "." [DPO:curators, PMID:10368269] is_a: DPO:000007 ! disordered region [Term] id: DPO:000390 name: carbonic anhydrase region 1 namespace: region def: "." [DPO:curators, PMID:10924115] is_a: DPO:000007 ! disordered region [Term] id: DPO:000391 name: protein C-ets-1 region 1 namespace: region def: "." [DPO:curators, PMID:9770451] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007221 ! protein C-ets-1 [Term] id: DPO:000392 name: protein C-ets-1 region 2 namespace: region def: "." [DPO:curators, PMID:15994560] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007221 ! protein C-ets-1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000393 name: desiccation-related protein clone PCC6-19 region 1 namespace: region def: "." [DPO:curators, PMID:9067253] is_a: DPO:000010 ! disordered - molten globule region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000058 ! molten globule to order transition [Term] id: DPO:000394 name: synaptobrevin homolog 1 region 1 namespace: region def: "." [DPO:curators, PMID:9326367] is_a: DPO:000007 ! disordered region [Term] id: DPO:000395 name: tubulin beta-4 chain region 1 namespace: region def: "." [DPO:curators, PMID:10211825] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000016820 ! tubulin beta-4 chain [Term] id: DPO:000396 name: osteocalcin region 1 namespace: region def: "." [DPO:curators, PMID:8101026, PMID:8218200] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000397 name: protein transport protein Sec61 subunit gamma region 1 namespace: region def: "." [DPO:curators, PMID:8942632] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000398 name: protein transport protein Sec61 subunit gamma region 2 namespace: region def: "." [DPO:curators, PMID:8942632] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000399 name: protein transport protein Sec61 subunit gamma region 3 namespace: region def: "." [DPO:curators, PMID:8942632] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000400 name: protein transport protein Sec61 subunit gamma region 4 namespace: region def: "." [DPO:curators, PMID:8942632] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000401 name: chromogranin-A region 1 namespace: region def: "." [DPO:curators, PMID:3473966, PMID:8243650] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000402 name: basic salivary proline-rich protein 4 region 1 namespace: region def: "." [DPO:curators, PMID:4093242] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013175 ! basic salivary proline-rich protein 4 [Term] id: DPO:000403 name: caldesmon region 1 namespace: region def: "." [DPO:curators, PMID:2803315, PMID:14635127, PMID:11996092] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000057 ! pre-molten globule to order transition [Term] id: DPO:000404 name: protein L precursor region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000405 name: protein L precursor region 2 namespace: region def: "." [DPO:curators, PMID:9007989] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000406 name: protein L precursor region 3 namespace: region def: "." [DPO:curators, PMID:9007989] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000407 name: protein L precursor region 4 namespace: region def: "." [DPO:curators, PMID:9007989] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000408 name: protein L precursor region 5 namespace: region def: "." [DPO:curators, PMID:9007989] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000409 name: protein L precursor region 6 namespace: region def: "." [DPO:curators, PMID:9007989] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000410 name: microtubule-associated protein 2 region 1 namespace: region def: "." [DPO:curators, PMID:15751971] is_a: DPO:000007 ! disordered region [Term] id: DPO:000411 name: T-cell surface glycoprotein CD4 region 1 namespace: region def: "." [DPO:curators, PMID:9622505] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001004 ! CD4 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000412 name: secretogranin-1 region 1 namespace: region def: "." [DPO:curators, PMID:9136897] is_a: DPO:000007 ! disordered region [Term] id: DPO:000413 name: somatoliberin region 1 namespace: region def: "." [DPO:curators, PMID:9375414] comment: U-90699F is an analog of the bovine growth hormone releasing factor. It is a fragment that contains the following substitutions: Ile32, Ser38, Ala45, Leu57, and Ser58. It also has a C-terminal tag of Hse-NH-ethyl x Ch3COOH. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000414 name: microtubule-associated protein tau [Isoform Tau-F] region 1 namespace: region def: "." [DPO:curators, PMID:14769047, PMID:2484340, PMID:15147841, PMID:7929085] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000415 name: microtubule-associated protein tau [Isoform Tau-F] region 2 namespace: region def: "." [DPO:curators, PMID:2484340, PMID:15147841, PMID:7929085] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000416 name: microtubule-associated protein tau [Isoform Tau-F] region 3 namespace: region def: "." [DPO:curators, PMID:14769047, PMID:2484340, PMID:7929085] comment: This the microtubule binding domain. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000417 name: microtubule-associated protein tau [Isoform Tau-F] region 4 namespace: region def: "." [DPO:curators, PMID:2484340, PMID:15147841, PMID:7929085] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000418 name: microtubule-associated protein tau [Isoform Tau-F] region 5 namespace: region def: "." [DPO:curators, PMID:14769047, PMID:2484340, PMID:7929085] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000419 name: microtubule-associated protein tau [Isoform Tau-F] region 6 namespace: region def: "." [DPO:curators, PMID:15654759] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000420 name: fibronectin binding protein region 1 namespace: region def: "." [DPO:curators, PMID:8576127] is_a: DPO:000007 ! disordered region [Term] id: DPO:000421 name: protein transport protein SEC9 region 1 namespace: region def: "." [DPO:curators, PMID:10048921] comment: Sec9 is completely disordered in isolation, but acquires some structure when forming a complex with Sso1. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000422 name: protein transport protein SEC9 region 2 namespace: region def: "." [DPO:curators, PMID:9326367] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000423 name: transcription factor p65 region 1 namespace: region def: "." [DPO:curators, PMID:12686541] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013875 ! transcription factor p65 [Term] id: DPO:000424 name: transcription factor p65 region 2 namespace: region def: "." [DPO:curators, PMID:12686541] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013875 ! transcription factor p65 [Term] id: DPO:000425 name: transcription factor p65 region 3 namespace: region def: "." [DPO:curators, PMID:9384558] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013875 ! transcription factor p65 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000036 ! nuclear localization [Term] id: DPO:000426 name: small proline-rich protein 2E region 1 namespace: region def: "." [DPO:curators, PMID:3133554, PMID:9722562] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000015577 ! small proline-rich protein 2E relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000427 name: small proline-rich protein 2E region 2 namespace: region def: "." [DPO:curators, PMID:3133554, PMID:9722562] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000015577 ! small proline-rich protein 2E relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000428 name: tropomodulin region 1 namespace: region def: "." [DPO:curators, PMID:11423419, PMID:15475586] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000429 name: calsequestrin-1 region 1 namespace: region def: "." [DPO:curators, PMID:4472093, PMID:6725251, PMID:6480588] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000430 name: calsequestrin-1 region 2 namespace: region def: "." [DPO:curators, PMID:9628486] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000431 name: calsequestrin-1 region 3 namespace: region def: "." [DPO:curators, PMID:9628486] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000432 name: calsequestrin-1 region 4 namespace: region def: "." [DPO:curators, PMID:9628486] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000433 name: fragile X mental retardation 1 protein region 1 namespace: region def: "." [DPO:curators, PMID:10496225] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000043 ! protein-mRNA binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:000434 name: fragile X mental retardation 1 protein region 2 namespace: region def: "." [DPO:curators, PMID:10496225] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000043 ! protein-mRNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000435 name: heat shock factor protein region 1 namespace: region def: "." [DPO:curators, PMID:8745404] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000436 name: histone H1.2 region 1 namespace: region def: "." [DPO:curators, PMID:9109385, PMID:2373370] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000437 name: histone H1.2 region 2 namespace: region def: "." [DPO:curators, PMID:9109385, PMID:2373370] is_a: DPO:000010 ! disordered - molten globule region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000058 ! molten globule to order transition [Term] id: DPO:000438 name: histone H1.2 region 3 namespace: region def: "." [DPO:curators, PMID:9109385, PMID:2373370] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000439 name: hirudin variant-1 region 1 namespace: region def: "." [DPO:curators, PMID:2567183, PMID:3013692] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000440 name: parathyroid hormone-related protein region 1 namespace: region def: "." [DPO:curators, PMID:10050767, PMID:8138348] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013433 ! parathyroid hormone-related protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000441 name: parathyroid hormone-related protein region 2 namespace: region def: "." [DPO:curators, PMID:10050767, PMID:8138348] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013433 ! parathyroid hormone-related protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000442 name: parathyroid hormone-related protein region 3 namespace: region def: "." [DPO:curators, PMID:10050767, PMID:8138348] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013433 ! parathyroid hormone-related protein relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000443 name: 50S ribosomal protein L27 region 1 namespace: region def: "." [DPO:curators, PMID:11673426, PMID:3297162] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023832 ! 50S ribosomal protein L27 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000444 name: zinc finger FYVE domain-containing protein 9 [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:15231848] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000000313 ! sara isoform 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000445 name: heat shock protein beta-1 region 1 namespace: region def: "." [DPO:curators, PMID:7649277] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008814 ! heat shock protein beta-1 relationship: has_function DPO:000011 ! chaperone relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000446 name: 50S ribosomal protein L33 region 1 namespace: region def: "." [DPO:curators, PMID:3297162] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023839 ! 50S ribosomal protein L33 [Term] id: DPO:000447 name: histone RNA hairpin-binding protein region 1 namespace: region def: "." [DPO:curators, PMID:15260482] is_a: DPO:000007 ! disordered region [Term] id: DPO:000448 name: 30S ribosomal protein S12 region 1 namespace: region def: "." [DPO:curators, PMID:6751823] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023865 ! 30S ribosomal protein S12 [Term] id: DPO:000449 name: 30S ribosomal protein S18 region 1 namespace: region def: "." [DPO:curators, PMID:6751823] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023871 ! 30S ribosomal protein S18 [Term] id: DPO:000450 name: 30S ribosomal protein S19 region 1 namespace: region def: "." [DPO:curators, PMID:6751823] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023872 ! 30S ribosomal protein S19 [Term] id: DPO:000451 name: DNA repair protein XRCC4 region 1 namespace: region def: "." [DPO:curators, PMID:11702069] comment: The experiments were conducted using a fragment of Xrcc4 spanning residues 1 - 213. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017507 ! DNA repair protein XRCC4 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding [Term] id: DPO:000452 name: DNA repair protein XRCC4 region 2 namespace: region def: "." [DPO:curators, PMID:11702069] comment: The experiments were conducted using a fragment of Xrcc4 spanning residues 1 - 213. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017507 ! DNA repair protein XRCC4 [Term] id: DPO:000453 name: DNA repair protein XRCC4 region 3 namespace: region def: "." [DPO:curators, PMID:11702069] comment: The experiments were conducted using a fragment of Xrcc4 spanning residues 1 - 213. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017507 ! DNA repair protein XRCC4 [Term] id: DPO:000454 name: DNA repair protein XRCC4 region 4 namespace: region def: "." [DPO:curators, PMID:11702069] comment: The experiments were conducted using a fragment of Xrcc4 spanning residues 1 - 213. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017507 ! DNA repair protein XRCC4 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding [Term] id: DPO:000455 name: DNA repair protein XRCC4 region 5 namespace: region def: "." [DPO:curators, PMID:11080143] comment: The experiments were conducted using a fragment of Xrcc4 spanning residues 1 - 265. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017507 ! DNA repair protein XRCC4 [Term] id: DPO:000456 name: DNA repair protein XRCC4 region 6 namespace: region def: "." [DPO:curators, PMID:11080143] comment: This region is disordered in the S subunit. The experiments were conducted using a fragment of Xrcc4 spanning residues 1 - 213. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000017507 ! DNA repair protein XRCC4 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000457 name: GTPase HRas region 1 namespace: region def: "." [DPO:curators, PMID:9230043] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000458 name: GTPase HRas region 2 namespace: region def: "." [DPO:curators, PMID:9230043] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000459 name: GTPase HRas region 3 namespace: region def: "." [DPO:curators, PMID:9230043] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000460 name: GTPase HRas region 4 namespace: region def: "." [DPO:curators, PMID:9230043, PMID:8142349] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000461 name: GTPase HRas region 5 namespace: region def: "." [DPO:curators, PMID:8142349, PMID:2406906] is_a: DPO:000007 ! disordered region [Term] id: DPO:000462 name: GTPase HRas region 6 namespace: region def: "." [DPO:curators, PMID:9230043] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000463 name: GTPase HRas region 7 namespace: region def: "." [DPO:curators, PMID:12842038] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000464 name: GTPase HRas region 8 namespace: region def: "." [DPO:curators, PMID:9230043] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000465 name: GTPase HRas region 9 namespace: region def: "." [DPO:curators, PMID:9230043] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000466 name: GTPase HRas region 10 namespace: region def: "." [DPO:curators, PMID:9230043] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000467 name: GTPase HRas region 11 namespace: region def: "." [DPO:curators, PMID:9230043, PMID:8142349, PMID:2406906] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000468 name: GTPase HRas region 12 namespace: region def: "." [DPO:curators, PMID:12842038] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000469 name: GTPase HRas region 13 namespace: region def: "." [DPO:curators, PMID:2406906] is_a: DPO:000007 ! disordered region [Term] id: DPO:000470 name: GTPase HRas region 14 namespace: region def: "." [DPO:curators, PMID:2406906] is_a: DPO:000007 ! disordered region [Term] id: DPO:000471 name: GTPase HRas region 15 namespace: region def: "." [DPO:curators, PMID:2406906] is_a: DPO:000007 ! disordered region [Term] id: DPO:000472 name: GTPase HRas region 16 namespace: region def: "." [DPO:curators, PMID:2406906] is_a: DPO:000007 ! disordered region [Term] id: DPO:000473 name: GTPase HRas region 17 namespace: region def: "." [DPO:curators, PMID:9230043] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000474 name: GTPase HRas region 18 namespace: region def: "." [DPO:curators, PMID:9230043, PMID:8142349] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000475 name: GTPase HRas region 19 namespace: region def: "." [DPO:curators, PMID:2406906] is_a: DPO:000007 ! disordered region [Term] id: DPO:000476 name: GTPase HRas region 20 namespace: region def: "." [DPO:curators, PMID:2406906] is_a: DPO:000007 ! disordered region [Term] id: DPO:000477 name: SHC-transforming protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:12906822] comment: This entry is from the characterization of the experimental fragment in complex with a 12 residue tyrosine-phosphated peptide. The experimental fragment consisted of residues 128 - 318 of the Swiss-Prot sequence. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003178 ! shc-transforming protein 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000478 name: SHC-transforming protein 1 region 2 namespace: region def: "." [DPO:curators, PMID:12906822] comment: This entry is from the characterization of a fragment containing residues 17-207 in solution. The experimental fragment consisted of residues 128 - 318 of the Swiss-Prot sequence. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003178 ! shc-transforming protein 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000479 name: SHC-transforming protein 1 region 3 namespace: region def: "." [DPO:curators, PMID:12906822] comment: This entry is from the characterization of a fragment containing residues 17-207 in solution. The experimental fragment consisted of residues 128 - 318 of the Swiss-Prot sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003178 ! shc-transforming protein 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000480 name: SHC-transforming protein 1 region 4 namespace: region def: "." [DPO:curators, PMID:12906822] comment: This entry is from the characterization of the experimental fragment in complex with a 12 residue tyrosine-phosphated peptide. The experimental fragment consisted of residues 128 - 318 of the Swiss-Prot sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003178 ! shc-transforming protein 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000481 name: SHC-transforming protein 1 region 5 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003178 ! shc-transforming protein 1 [Term] id: DPO:000482 name: syntaxin-1A region 1 namespace: region def: "." [DPO:curators, PMID:12680753] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000483 name: UV excision repair protein RAD23 homolog A region 1 namespace: region def: "." [DPO:curators, PMID:14557549] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013669 ! UV excision repair protein RAD23 A relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000484 name: UV excision repair protein RAD23 homolog A region 2 namespace: region def: "." [DPO:curators, PMID:14557549] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013669 ! UV excision repair protein RAD23 A relationship: has_function DPO:000012 ! entropic chain relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000485 name: UV excision repair protein RAD23 homolog A region 3 namespace: region def: "." [DPO:curators, PMID:14557549] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013669 ! UV excision repair protein RAD23 A relationship: has_function DPO:000012 ! entropic chain relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000486 name: UV excision repair protein RAD23 homolog A region 4 namespace: region def: "." [DPO:curators, PMID:14557549] comment: The UBL region interacts with UBA domains of the same protein. It is unable to bind to both simultaneously, but does so in equilibrium with each. is_a: DPO:000006 ! ordered region relationship: part_of PRO:000013669 ! UV excision repair protein RAD23 A relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000487 name: UV excision repair protein RAD23 homolog A region 5 namespace: region def: "." [DPO:curators, PMID:14557549] comment: The UBA1 domain binds with the UBL domain of the same protein. It does so at equilibrium with UBA2. is_a: DPO:000006 ! ordered region relationship: part_of PRO:000013669 ! UV excision repair protein RAD23 A relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000488 name: UV excision repair protein RAD23 homolog A region 6 namespace: region def: "." [DPO:curators, PMID:14557549] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000013669 ! UV excision repair protein RAD23 A [Term] id: DPO:000489 name: UV excision repair protein RAD23 homolog A region 7 namespace: region def: "." [DPO:curators, PMID:14557549] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000013669 ! UV excision repair protein RAD23 A relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000490 name: cell invasion protein sipA region 1 namespace: region def: "." [DPO:curators, PMID:14512630] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000491 name: cell invasion protein sipA region 2 namespace: region def: "." [DPO:curators, PMID:14512630] is_a: DPO:000006 ! ordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000038 ! polymerization relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000492 name: cell invasion protein sipA region 3 namespace: region def: "." [DPO:curators, PMID:14512630] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000493 name: ssl1911 protein region 1 namespace: region def: "." [DPO:curators, PMID:12824490] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000494 name: cadherin-1 region 1 namespace: region def: "." [DPO:curators, PMID:11121423] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001447 ! epithelial cadherin relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000495 name: nucleoprotein region 1 namespace: region def: "." [DPO:curators, PMID:12621042, PMID:3211755] is_a: DPO:000009 ! disordered - pre-molten globule region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000496 name: cell division protein zipA region 1 namespace: region def: "." [DPO:curators, PMID:12107152] comment: The EM used in this study is a novel approach to demonstrate an unstructured protein. The unstructured protein is placed between two small globular domains and imaged by EM. Knowing the contour length, one can determine the persistance lengh from the average spacing of the two globular domains. A persistence length of 0.3-0.6 nm is characteristic of an unstructrured protein. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000024247 ! cell division protein zipA [Term] id: DPO:000497 name: stannin region 1 namespace: region def: "." [DPO:curators, PMID:16246365] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015329 ! stannin relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000498 name: protein GIR2 region 1 namespace: region def: "." [DPO:curators, PMID:15896712] is_a: DPO:000007 ! disordered region [Term] id: DPO:000499 name: 60S acidic ribosomal protein P1-alpha region 1 namespace: region def: "." [DPO:curators, PMID:10913306] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000500 name: pyridoxine/pyridoxamine 5'-phosphate oxidase region 1 namespace: region def: "." [DPO:curators, PMID:15858270] comment: Disorder in this region is found in monomer A of the tetragonal unit cell. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023504 ! pyridoxine/pyridoxamine 5'-phosphate oxidase relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000501 name: pyridoxine/pyridoxamine 5'-phosphate oxidase region 2 namespace: region def: "." [DPO:curators, PMID:15858270] comment: Disorder in this region is found in monomer B of the tetragonal unit cell. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023504 ! pyridoxine/pyridoxamine 5'-phosphate oxidase relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000502 name: pyridoxine/pyridoxamine 5'-phosphate oxidase region 3 namespace: region def: "." [DPO:curators, PMID:15858270] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023504 ! pyridoxine/pyridoxamine 5'-phosphate oxidase relationship: has_function DPO:000014 ! modification site relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000503 name: pyridoxine/pyridoxamine 5'-phosphate oxidase region 4 namespace: region def: "." [DPO:curators, PMID:15858270] comment: Disorder in this region is found in monomer B of the tetragonal unit cell. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023504 ! pyridoxine/pyridoxamine 5'-phosphate oxidase relationship: has_function DPO:000014 ! modification site relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000504 name: troponin I, cardiac muscle region 1 namespace: region def: "." [DPO:curators, PMID:12840750] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016506 ! troponin I, cardiac muscle relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000505 name: troponin I, cardiac muscle region 2 namespace: region def: "." [DPO:curators, PMID:12840750] comment: This disordered region becomes ordered when in complex with Troponin T. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016506 ! troponin I, cardiac muscle relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000506 name: troponin I, cardiac muscle region 3 namespace: region def: "." [DPO:curators, PMID:12840750] comment: This disordered region is thought to be the binding sites for actin and tropomyosin. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016506 ! troponin I, cardiac muscle relationship: has_function DPO:000012 ! entropic chain relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000507 name: troponin I, cardiac muscle region 4 namespace: region def: "." [DPO:curators, PMID:12840750] comment: Residues 163-191 were disordered in one of the two Troponin I molecules that were obtained through crystallization. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016506 ! troponin I, cardiac muscle relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000508 name: troponin I, cardiac muscle region 5 namespace: region def: "." [DPO:curators, PMID:12840750] comment: This disordered region undergoes a conformational change when interacting with other Troponin moledules. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016506 ! troponin I, cardiac muscle relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000509 name: troponin I, cardiac muscle region 6 namespace: region def: "." [DPO:curators, PMID:12840750] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000016506 ! troponin I, cardiac muscle relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000510 name: ras-related protein Rap-2a region 1 namespace: region def: "." [DPO:curators, PMID:9312017] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013723 ! ras-related protein Rap-2a relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000511 name: ras-related protein Rap-2a region 2 namespace: region def: "." [DPO:curators, PMID:10591105] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013723 ! ras-related protein Rap-2a relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000512 name: ras-related protein Rap-2a region 3 namespace: region def: "." [DPO:curators, PMID:9312017] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013723 ! ras-related protein Rap-2a relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000513 name: ras-related protein Rap-2a region 4 namespace: region def: "." [DPO:curators, PMID:10591105] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013723 ! ras-related protein Rap-2a relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000514 name: ras-related protein Rap-2a region 5 namespace: region def: "." [DPO:curators, PMID:10591105] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013723 ! ras-related protein Rap-2a relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000515 name: pyridoxine-5'-phosphate oxidase region 1 namespace: region def: "." [DPO:curators, PMID:12824491] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012949 ! pyridoxine-5'-phosphate oxidase relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000516 name: tubulin beta-2 chain region 1 namespace: region def: "." [DPO:curators, PMID:10211825] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000517 name: tubulin beta-2 chain region 2 namespace: region def: "." [DPO:curators, PMID:10211825] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000518 name: tubulin beta-2 chain region 3 namespace: region def: "." [DPO:curators, PMID:10211825] comment: Disorder may be caused by the truncation of this fragment is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000519 name: tubulin beta-2 chain region 4 namespace: region def: "." [DPO:curators, PMID:10211825] comment: Disorder may be caused by the truncation of this fragment is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000520 name: tubulin beta-2 chain region 5 namespace: region def: "." [DPO:curators, PMID:10211825] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000521 name: dehydrin-like protein region 1 namespace: region def: "." [DPO:curators, PMID:12644649] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000522 name: RAF proto-oncogene serine/threonine-protein kinase region 1 namespace: region def: "." [DPO:curators, PMID:7791872] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000523 name: RAF proto-oncogene serine/threonine-protein kinase region 2 namespace: region def: "." [DPO:curators, PMID:7766599] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000524 name: RAF proto-oncogene serine/threonine-protein kinase region 3 namespace: region def: "." [DPO:curators, PMID:7766599] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000525 name: RAF proto-oncogene serine/threonine-protein kinase region 4 namespace: region def: "." [DPO:curators, PMID:7766599] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000526 name: RAF proto-oncogene serine/threonine-protein kinase region 5 namespace: region def: "." [DPO:curators, PMID:7791872] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000527 name: RAF proto-oncogene serine/threonine-protein kinase region 6 namespace: region def: "." [DPO:curators, PMID:8756332] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000528 name: RAF proto-oncogene serine/threonine-protein kinase region 7 namespace: region def: "." [DPO:curators, PMID:7766599] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000529 name: RAF proto-oncogene serine/threonine-protein kinase region 8 namespace: region def: "." [DPO:curators, PMID:7766599] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000530 name: RAF proto-oncogene serine/threonine-protein kinase region 9 namespace: region def: "." [DPO:curators, PMID:8710867] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000531 name: RAF proto-oncogene serine/threonine-protein kinase region 10 namespace: region def: "." [DPO:curators, PMID:8710867] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000532 name: RAF proto-oncogene serine/threonine-protein kinase region 11 namespace: region def: "." [DPO:curators, PMID:8710867] comment: Disordered region may be present due to the fragmentation of the sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003244 ! RAF proto-oncogene serine/threonine-protein kinase [Term] id: DPO:000533 name: POU domain class 2-associating factor 1 region 1 namespace: region def: "." [DPO:curators, PMID:10541551] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013034 ! POU domain class 2-associating factor 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000534 name: POU domain class 2-associating factor 1 region 2 namespace: region def: "." [DPO:curators, PMID:10541551] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013034 ! POU domain class 2-associating factor 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000535 name: POU domain class 2-associating factor 1 region 3 namespace: region def: "." [DPO:curators, PMID:10541551] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013034 ! POU domain class 2-associating factor 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000536 name: POU domain class 2-associating factor 1 region 4 namespace: region def: "." [DPO:curators, PMID:10541551] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000013034 ! POU domain class 2-associating factor 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000537 name: DNA fragmentation factor subunit alpha [Isoform DFF45] region 1 namespace: region def: "." [DPO:curators, PMID:11371636] comment: This fragment is disordered in solution and becomes ordered when it interacts with DFF40. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002283 ! DNA fragmentation factor subunit alpha isoform 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000538 name: stathmin region 1 namespace: region def: "." [DPO:curators, PMID:12860982, PMID:10675326] comment: pH had little to no effect upon the disordered regions of this protein. Temperature however, did play a factor in measurement of the disordered regions. At lower temperatures, such as 5 C, this protein was found to be extensively helical. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015759 ! stathmin relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000539 name: transcription factor 7-like 2 region 1 namespace: region def: "." [DPO:curators, PMID:11237626, PMID:11713476] comment: In the PDB file, the disorder to order transition upon binding with beta-catenin can be seen: residues 13-25 and 40-50 form alpha helicies upon binding to the armadillo repeats of catenin. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000016186 ! transcription factor 7-like 2 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000540 name: **Fe(3+)-pyochelin receptor** region 1 namespace: region def: "." [DPO:curators, PMID:16139844] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000541 name: **Fe(3+)-pyochelin receptor** region 2 namespace: region def: "." [DPO:curators, PMID:16139844] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000542 name: **Fe(3+)-pyochelin receptor** region 3 namespace: region def: "." [DPO:curators, PMID:16139844] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000543 name: RNA polymerase II subunit A C-terminal domain phosphatase region 1 namespace: region def: "." [DPO:curators, PMID:12732728] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005999 ! RNA polymerase II subunit A C-terminal domain phosphatase relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000544 name: protease A inhibitor 3 region 1 namespace: region def: "." [DPO:curators, PMID:10655612] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000545 name: salt-mediated killer protoxin 1 region 1 namespace: region def: "." [DPO:curators, PMID:9089808] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000546 name: DNA-directed RNA polymerase II subunit RPB1 region 1 namespace: region def: "." [DPO:curators, PMID:10704311] comment: The first 8 repeats of SPTSPSY that make up this region are essential. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012987 ! DNA-directed RNA polymerase II subunit RPB1 [Term] id: DPO:000547 name: DNA-directed RNA polymerase II subunit RPB1 region 2 namespace: region def: "." [DPO:curators, PMID:10704311] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012987 ! DNA-directed RNA polymerase II subunit RPB1 [Term] id: DPO:000548 name: ferripyoverdine receptor region 1 namespace: region def: "." [DPO:curators, PMID:15733922] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000549 name: vitamin D3 receptor region 1 namespace: region def: "." [DPO:curators, PMID:10678179] comment: Experimental sequence extended from 410 to 1202 of the SwissProt sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017283 ! vitamin D3 receptor [Term] id: DPO:000550 name: late embryogenesis-abundant protein region 1 namespace: region def: "." [DPO:curators, PMID:11891239] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000551 name: late embryogenesis abundant protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:12569097] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000552 name: major prion protein region 1 namespace: region def: "." [DPO:curators, PMID:9391046] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000553 name: major prion protein region 2 namespace: region def: "." [DPO:curators, PMID:9391046] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000554 name: protein Nef region 1 namespace: region def: "." [DPO:curators, PMID:10339411] comment: The experimental protein consisted of residues 2 - 57 of SwissProt entry P04324. is_a: DPO:000007 ! disordered region [Term] id: DPO:000555 name: protein Nef region 2 namespace: region def: "." [DPO:curators, PMID:10339411] comment: The experimental protein consisted of residues 2 - 57 of SwissProt entry P04324. is_a: DPO:000006 ! ordered region [Term] id: DPO:000556 name: protein Nef region 3 namespace: region def: "." [DPO:curators, PMID:10339411] comment: The experimental protein consisted of residues 2 - 57 of SwissProt entry P04324. is_a: DPO:000007 ! disordered region [Term] id: DPO:000557 name: protein Nef region 4 namespace: region def: "." [DPO:curators, PMID:10339411] comment: The experimental protein consisted of residues 2 - 57 of SwissProt entry P04324. is_a: DPO:000006 ! ordered region [Term] id: DPO:000558 name: protein Nef region 5 namespace: region def: "." [DPO:curators, PMID:10339411] comment: The experimental protein consisted of residues 2 - 57 of SwissProt entry P04324. is_a: DPO:000007 ! disordered region [Term] id: DPO:000559 name: sulfite reductase [NADPH] flavoprotein alpha-component region 1 namespace: region def: "." [DPO:curators, PMID:10860732] comment: This is the FMN binding domain of this protein. It transfers electrons from the ferredoxin NADP+ reductase (FNR) module to the beta subunit, which contains Fe4S4 and siroheme. The FMN of one molecule binds to the FNR of an adjacent molecule. The flexibility of this region is believed to be important in optimal molecular arrangment during electron transfer. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022381 ! sulfite reductase [NADPH] flavoprotein alpha-component relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000022 ! cofactor/heme binding relationship: has_subfunction DPO:000026 ! electron transfer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000560 name: sulfite reductase [NADPH] flavoprotein alpha-component region 2 namespace: region def: "." [DPO:curators, PMID:10860732] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000022381 ! sulfite reductase [NADPH] flavoprotein alpha-component relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000022 ! cofactor/heme binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000561 name: sulfite reductase [NADPH] flavoprotein alpha-component region 3 namespace: region def: "." [DPO:curators, PMID:10860732] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000022381 ! sulfite reductase [NADPH] flavoprotein alpha-component relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000562 name: sulfite reductase [NADPH] flavoprotein alpha-component region 4 namespace: region def: "." [DPO:curators, PMID:10860732] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000022381 ! sulfite reductase [NADPH] flavoprotein alpha-component relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000022 ! cofactor/heme binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000563 name: sulfite reductase [NADPH] flavoprotein alpha-component region 5 namespace: region def: "." [DPO:curators, PMID:10860732] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000022381 ! sulfite reductase [NADPH] flavoprotein alpha-component [Term] id: DPO:000564 name: sulfite reductase [NADPH] flavoprotein alpha-component region 6 namespace: region def: "." [DPO:curators, PMID:10860732] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022381 ! sulfite reductase [NADPH] flavoprotein alpha-component relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000022 ! cofactor/heme binding relationship: has_subfunction DPO:000026 ! electron transfer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000565 name: plasminogen region 1 namespace: region def: "." [DPO:curators, PMID:15299951] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000566 name: plasminogen region 2 namespace: region def: "." [DPO:curators, PMID:15299951] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000567 name: plasminogen region 3 namespace: region def: "." [DPO:curators, PMID:15299951] comment: This residue is part of the first disordered residue patch on the surface of the protein. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000568 name: plasminogen region 4 namespace: region def: "." [DPO:curators, PMID:15299951] comment: This residue is part of the second disordered residue patch on the surface of the protein. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000569 name: plasminogen region 5 namespace: region def: "." [DPO:curators, PMID:15299951] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000570 name: plasminogen region 6 namespace: region def: "." [DPO:curators, PMID:15299951] comment: This residue is part of the second disordered residue patch on the surface of the protein. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000571 name: plasminogen region 7 namespace: region def: "." [DPO:curators, PMID:15299951] comment: The carbonyl group of this residue is associated with serine 91 via a strong water-mediated hydrogen bond to the nitrogen atom of the amide group. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000572 name: plasminogen region 8 namespace: region def: "." [DPO:curators, PMID:15299951] comment: Part of a disordered disulfide bridge (with residue 426). is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000573 name: plasminogen region 9 namespace: region def: "." [DPO:curators, PMID:15299951] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000574 name: plasminogen region 10 namespace: region def: "." [DPO:curators, PMID:15299951] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000575 name: plasminogen region 11 namespace: region def: "." [DPO:curators, PMID:15299951] comment: Part of a disordered disulfide bridge (with residue 449). is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012867 ! plasminogen [Term] id: DPO:000576 name: kappa-casein region 1 namespace: region def: "." [DPO:curators, PMID:11784308] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly [Term] id: DPO:000577 name: kappa-casein region 2 namespace: region def: "." [DPO:curators, PMID:6402987] is_a: DPO:000007 ! disordered region [Term] id: DPO:000578 name: kappa-casein region 3 namespace: region def: "." [DPO:curators, PMID:6402987] is_a: DPO:000007 ! disordered region [Term] id: DPO:000579 name: kappa-casein region 4 namespace: region def: "." [DPO:curators, PMID:6402987] is_a: DPO:000007 ! disordered region [Term] id: DPO:000580 name: kappa-casein region 5 namespace: region def: "." [DPO:curators, PMID:6402987] is_a: DPO:000007 ! disordered region [Term] id: DPO:000581 name: beta-lactoglobulin region 1 namespace: region def: "." [DPO:curators, PMID:9141136] is_a: DPO:000010 ! disordered - molten globule region [Term] id: DPO:000582 name: stringent starvation protein B region 1 namespace: region def: "." [DPO:curators, PMID:14536075] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023993 ! stringent starvation protein B relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000583 name: non-histone chromosomal protein HMG-17 region 1 namespace: region def: "." [DPO:curators, PMID:565710] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000584 name: calpastatin region 1 namespace: region def: "." [DPO:curators, PMID:15751971] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005060 ! calpastatin [Term] id: DPO:000585 name: translation initiation factor IF-3 region 1 namespace: region def: "." [DPO:curators, PMID:9054966] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023014 ! translation initiation factor IF-3 relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer [Term] id: DPO:000586 name: transcriptional activator protein traR region 1 namespace: region def: "." [DPO:curators, PMID:11171981] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000587 name: beta-casein region 1 namespace: region def: "." [DPO:curators, PMID:3074304, PMID:4624541] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000005941 ! beta-casein relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000017 ! molecular recognition scavenger relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000588 name: T-cell surface glycoprotein CD3 zeta chain [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:14967045] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001029 ! CD247 isoform CD3 zeta relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000589 name: ATP synthase-coupling factor 6, mitochondrial region 1 namespace: region def: "." [DPO:curators, PMID:15327958] comment: The SwissProt sequence includes a signal sequence that spans from residue 1 to 32 and was not included in the experimental sequence. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000590 name: ATP synthase-coupling factor 6, mitochondrial region 2 namespace: region def: "." [DPO:curators, PMID:15327958] comment: The SwissProt sequence includes a signal sequence that spans from residue 1 to 32 and was not included in the experimental sequence. is_a: DPO:000007 ! disordered region [Term] id: DPO:000591 name: ATP synthase-coupling factor 6, mitochondrial region 3 namespace: region def: "." [DPO:curators, PMID:15327958] comment: The SwissProt sequence includes a signal sequence that spans from residue 1 to 32 and was not included in the experimental sequence. is_a: DPO:000007 ! disordered region [Term] id: DPO:000592 name: UPF0243 zinc-binding protein yacG region 1 namespace: region def: "." [DPO:curators, PMID:12211008] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000593 name: UPF0243 zinc-binding protein yacG region 2 namespace: region def: "." [DPO:curators, PMID:12211008] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000594 name: thermonuclease region 1 namespace: region def: "." [DPO:curators, PMID:2780539] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000595 name: thermonuclease region 2 namespace: region def: "." [DPO:curators, PMID:1896431] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000596 name: thermonuclease region 3 namespace: region def: "." [DPO:curators, PMID:2780539] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000597 name: thermonuclease region 4 namespace: region def: "." [DPO:curators, PMID:1896431] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000598 name: thermonuclease region 5 namespace: region def: "." [DPO:curators, PMID:1896431] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000599 name: metal-binding protein smbP region 1 namespace: region def: "." [DPO:curators, PMID:15366930] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000013 ! metal sponge relationship: has_subfunction DPO:000034 ! metal binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000600 name: fimbrial protein region 1 namespace: region def: "." [DPO:curators, PMID:11294863] comment: The experimental sequence consisted of seven residues from the cloning vector followed by residues 8 through 157 of SwissProt sequence P17838. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000601 name: fimbrial protein region 2 namespace: region def: "." [DPO:curators, PMID:11294863] comment: The experimental sequence consisted of seven residues from the cloning vector followed by residues 8 through 157 of SwissProt sequence P17838. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000602 name: fimbrial protein region 3 namespace: region def: "." [DPO:curators, PMID:11294863] comment: The experimental sequence consisted of seven residues from the cloning vector followed by residues 8 through 157 of SwissProt sequence P17838. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000603 name: fimbrial protein region 4 namespace: region def: "." [DPO:curators, PMID:11294863] comment: The experimental sequence consisted of seven residues from the cloning vector followed by residues 8 through 157 of SwissProt sequence P17838. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000604 name: fimbrial protein region 5 namespace: region def: "." [DPO:curators, PMID:11294863] comment: The experimental sequence consisted of seven residues from the cloning vector followed by residues 8 through 157 of SwissProt sequence P17838. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000605 name: fimbrial protein region 6 namespace: region def: "." [DPO:curators, PMID:11294863] comment: The experimental sequence consisted of seven residues from the cloning vector followed by residues 8 through 157 of SwissProt sequence P17838. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000606 name: ribonuclease E region 1 namespace: region def: "." [DPO:curators, PMID:15236960] comment: CTD can be cross-linked to itself, thus forming dimers. The region that can self-interact is from 500-752 residues. Within the disordered CTD, there are four regions that have predicted structural propensity. These segments are called RISPs (regions of increased structural propensity). The RISPs are; segment A- residues 565-585, segment B- residues 633-712, segment C- residues 839-850 and segment D- residues 1021-1061. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023789 ! ribonuclease E relationship: has_subfunction DPO:000045 ! protein-rRNA binding relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000607 name: ribonuclease E region 2 namespace: region def: "." [DPO:curators, PMID:15236960] comment: The experimental domain included the coiled coil segment B region. The 7SrRNA binding region is within this domain. There is an arginine-rich region within this domain, residues 796-819, that may gain some structure upon the binding to RNA. This domain contains the portion of the disordered CTD that binds helicase RhlB. It binds helicase RhlB in a 1:1 ratio. The binding of helicase RhlB to this domain stimulates the ATPase activity of the helicase. Binding to the helicase protein does not induce folding of the R-domain. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023789 ! ribonuclease E relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000045 ! protein-rRNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000608 name: ribonuclease E region 3 namespace: region def: "." [DPO:curators, PMID:15236960] comment: This region is completely contained within the R-domain. This region is disordered because it is within the CTD domain of the protein but it is thought to gain structure upon the binding of RNA. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000023789 ! ribonuclease E relationship: has_subfunction DPO:000045 ! protein-rRNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000609 name: ribonuclease E region 4 namespace: region def: "." [DPO:curators, PMID:15236960] comment: This domain contains the entire C segment, residues 839-850. This fragment is a version of CTD isolated under native conditions without affinity tags. This domain was co-purified with enolase. The binding region included residues 816-1038. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000023789 ! ribonuclease E relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000610 name: sortase region 1 namespace: region def: "." [DPO:curators, PMID:11371637, PMID:15117963] comment: The PDB file does not contain the first 59 amino acids of the sequence (Zhong 2004). It was shown that the removal of this N terminal region had no effect on the enzymatic activity of the protein. The disordered region is part of the "catalytic core" of the protein (Ilangovan 2001). is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000611 name: beta-defensin 12 region 1 namespace: region def: "." [DPO:curators, PMID:7577957] is_a: DPO:000007 ! disordered region [Term] id: DPO:000612 name: growth factor receptor-bound protein 2 region 1 namespace: region def: "." [DPO:curators, PMID:11178911] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008224 ! growth factor receptor-bound protein 2 relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000613 name: growth factor receptor-bound protein 2 region 2 namespace: region def: "." [DPO:curators, PMID:11178911] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008224 ! growth factor receptor-bound protein 2 relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000614 name: insulin-like growth factor-binding protein 6 region 1 namespace: region def: "." [DPO:curators, PMID:15308688] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008952 ! insulin-like growth factor-binding protein 6 [Term] id: DPO:000615 name: insulin-like growth factor-binding protein 6 region 2 namespace: region def: "." [DPO:curators, PMID:15308688] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008952 ! insulin-like growth factor-binding protein 6 [Term] id: DPO:000616 name: insulin-like growth factor-binding protein 6 region 3 namespace: region def: "." [DPO:curators, PMID:15308688] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008952 ! insulin-like growth factor-binding protein 6 [Term] id: DPO:000617 name: osteopontin region 1 namespace: region def: "." [DPO:curators, PMID:11162539] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015561 ! osteopontin relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000618 name: wiskott-Aldrich syndrome protein region 1 namespace: region def: "." [DPO:curators, PMID:10724160] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017371 ! wiskott-Aldrich syndrome protein relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000619 name: wiskott-Aldrich syndrome protein region 2 namespace: region def: "." [DPO:curators, PMID:10724160] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017371 ! wiskott-Aldrich syndrome protein relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000620 name: wiskott-Aldrich syndrome protein region 3 namespace: region def: "." [DPO:curators, PMID:10724160] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017371 ! wiskott-Aldrich syndrome protein [Term] id: DPO:000621 name: BN28a region 1 namespace: region def: "." [DPO:curators, PMID:9046590] is_a: DPO:000007 ! disordered region [Term] id: DPO:000622 name: nucleoplasmin region 1 namespace: region def: "." [DPO:curators, PMID:11248694] is_a: DPO:000007 ! disordered region [Term] id: DPO:000623 name: protein phosphatase 1 regulatory subunit 12A [Isoform 2] region 1 namespace: region def: "." [DPO:curators, PMID:15164081] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000624 name: protein phosphatase 1 regulatory subunit 11 region 1 namespace: region def: "." [DPO:curators, PMID:9843442] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013106 ! protein phosphatase 1 regulatory subunit 11 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000625 name: peripherin-2 region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000008 ! disordered - extended region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000626 name: involucrin region 1 namespace: region def: "." [DPO:curators, PMID:10601302] comment: Experimental fragment was three repeats of LEQQEGQLEH. This consensus repeat sequence had the following deviations from the native sequence; E248Q and E354K. Note that there are several LEQQEGQLEH repeats in native sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000009167 ! involucrin [Term] id: DPO:000627 name: involucrin region 2 namespace: region def: "." [DPO:curators, PMID:10601302] comment: The experimental sequence consisted of three repeats of PEQQEGQLEL. Note that there are several PEQQEGQLEL repeats in the native sequence. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000009167 ! involucrin [Term] id: DPO:000628 name: nucleoporin NUP2 region 1 namespace: region def: "." [DPO:curators, PMID:12065587] is_a: DPO:000007 ! disordered region [Term] id: DPO:000629 name: G2/mitotic-specific cyclin-B1 region 1 namespace: region def: "." [DPO:curators, PMID:12220679] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005116 ! G2/mitotic-specific cyclin-B1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000630 name: transcription factor 4 region 1 namespace: region def: "." [DPO:curators, PMID:11237626] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000016183 ! transcription factor 4 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000631 name: transcription factor 4 region 2 namespace: region def: "." [DPO:curators, PMID:11237626] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000016183 ! transcription factor 4 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000632 name: transcription factor 4 region 3 namespace: region def: "." [DPO:curators, PMID:11237626] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000016183 ! transcription factor 4 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000633 name: clathrin coat assembly protein AP180 region 1 namespace: region def: "." [DPO:curators, PMID:11756460] is_a: DPO:000007 ! disordered region [Term] id: DPO:000634 name: calcyclin-binding protein region 1 namespace: region def: "." [DPO:curators, PMID:15996101] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000004958 ! calcyclin-binding protein relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000635 name: calcyclin-binding protein region 2 namespace: region def: "." [DPO:curators, PMID:15996101] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004958 ! calcyclin-binding protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000636 name: calcyclin-binding protein region 3 namespace: region def: "." [DPO:curators, PMID:15996101] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000004958 ! calcyclin-binding protein relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000637 name: calcyclin-binding protein region 4 namespace: region def: "." [DPO:curators, PMID:15996101] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004958 ! calcyclin-binding protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000638 name: omega gliadin storage protein region 1 namespace: region def: "." [DPO:curators, PMID:12741823] is_a: DPO:000007 ! disordered region [Term] id: DPO:000639 name: voltage-dependent L-type calcium channel subunit alpha-1S region 1 namespace: region def: "." [DPO:curators, PMID:12620094] comment: Peptide C is sufficient to activate the ryanodine receptor at physiological concentrations. Structure determination experiments were conducted on isolated peptide C. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000640 name: lupus La protein region 1 namespace: region def: "." [DPO:curators, PMID:12842046] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015647 ! lupus La protein [Term] id: DPO:000641 name: lupus La protein region 2 namespace: region def: "." [DPO:curators, PMID:16387655] comment: This disordered protein entry is based solely on missing electron density in the Protein Data Bank. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015647 ! lupus La protein [Term] id: DPO:000642 name: lupus La protein region 3 namespace: region def: "." [DPO:curators, PMID:16387655] comment: This disordered protein entry is based solely on missing electron density in the Protein Data Bank. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015647 ! lupus La protein [Term] id: DPO:000643 name: lupus La protein region 4 namespace: region def: "." [DPO:curators, PMID:12842046] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015647 ! lupus La protein [Term] id: DPO:000644 name: lupus La protein region 5 namespace: region def: "." [DPO:curators, PMID:15004549] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015647 ! lupus La protein relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000645 name: growth factor receptor-bound protein 14 region 1 namespace: region def: "." [DPO:curators, PMID:14623073] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000008223 ! growth factor receptor-bound protein 14 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000646 name: POU domain, class 2, transcription factor 1 region 1 namespace: region def: "." [DPO:curators, PMID:11380252] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013035 ! POU domain, class 2, transcription factor 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000647 name: POU domain, class 2, transcription factor 1 region 2 namespace: region def: "." [DPO:curators, PMID:11380252] comment: There was no increase in structure when a fragment of Oct-1 containing the activation domain was incubated with the binding partner, Bob-1. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013035 ! POU domain, class 2, transcription factor 1 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000648 name: POU domain, class 2, transcription factor 1 region 3 namespace: region def: "." [DPO:curators, PMID:8479524, PMID:8156594] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013035 ! POU domain, class 2, transcription factor 1 relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000649 name: POU domain, class 2, transcription factor 1 region 4 namespace: region def: "." [DPO:curators, PMID:8479524] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013035 ! POU domain, class 2, transcription factor 1 relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000650 name: protein phosphatase inhibitor 2 region 1 namespace: region def: "." [DPO:curators, PMID:6245879, PMID:10807923] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000651 name: fibrinogen alpha chain [Isoform 1 (Alpha-E)] region 1 namespace: region def: "." [DPO:curators, PMID:11601975] is_a: DPO:000007 ! disordered region [Term] id: DPO:000652 name: fibrinogen alpha chain [Isoform 1 (Alpha-E)] region 2 namespace: region def: "." [DPO:curators, PMID:11601975] is_a: DPO:000007 ! disordered region [Term] id: DPO:000653 name: fibrinogen beta chain region 1 namespace: region def: "." [DPO:curators, PMID:11601975] is_a: DPO:000007 ! disordered region [Term] id: DPO:000654 name: fibrinogen gamma chain region 1 namespace: region def: "." [DPO:curators, PMID:11601975] is_a: DPO:000007 ! disordered region [Term] id: DPO:000655 name: fibrinogen gamma chain region 2 namespace: region def: "." [DPO:curators, PMID:11601975] is_a: DPO:000007 ! disordered region [Term] id: DPO:000656 name: myelin basic protein region 1 namespace: region def: "." [DPO:curators, PMID:7500383] comment: The experimental sequence was the 18.5 kDa isoform and therefore did not include residues 1 - 133 of the sequence listed in SwissProt. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010228 ! myelin basic protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000657 name: myelin basic protein region 1 namespace: region def: "." [DPO:curators, PMID:12372316] comment: The experimental sequence was the 18.5 kDa isoform. The experimental sequence had a C-terminal hexahistidine tagged. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010228 ! myelin basic protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000658 name: breast cancer type 1 susceptibility protein region 1 namespace: region def: "." [DPO:curators, PMID:15571721] comment: The structure of the 1480 residue central region was investigated by characterizing 21 different fragments. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004803 ! breast cancer type 1 susceptibility protein relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000659 name: breast cancer type 1 susceptibility protein region 2 namespace: region def: "." [DPO:curators, PMID:15609993] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004803 ! breast cancer type 1 susceptibility protein [Term] id: DPO:000660 name: breast cancer type 1 susceptibility protein region 3 namespace: region def: "." [DPO:curators, PMID:15609993] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004803 ! breast cancer type 1 susceptibility protein [Term] id: DPO:000661 name: breast cancer type 1 susceptibility protein region 4 namespace: region def: "." [DPO:curators, PMID:15609993] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004803 ! breast cancer type 1 susceptibility protein [Term] id: DPO:000662 name: breast cancer type 1 susceptibility protein region 5 namespace: region def: "." [DPO:curators, PMID:15609993] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004803 ! breast cancer type 1 susceptibility protein [Term] id: DPO:000663 name: carbon monoxide dehydrogenase region 1 namespace: region def: "." [DPO:curators, PMID:11593006] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000664 name: carbon monoxide dehydrogenase region 2 namespace: region def: "." [DPO:curators, PMID:11593006] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000665 name: alpha-adducin [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:7642559] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000666 name: beta-adducin [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:7642559] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000667 name: 30S ribosomal protein S17 region 1 namespace: region def: "." [DPO:curators, PMID:6751823] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023870 ! 30S ribosomal protein S17 relationship: has_function DPO:000015 ! molecular assembly [Term] id: DPO:000668 name: DNA-repair protein complementing XP-A cells region 1 namespace: region def: "." [DPO:curators, PMID:9699634, PMID:10050037] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017493 ! DNA repair protein complementing XP-A cells [Term] id: DPO:000669 name: DNA-repair protein complementing XP-A cells region 2 namespace: region def: "." [DPO:curators, PMID:9699634, PMID:10050037] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017493 ! DNA repair protein complementing XP-A cells [Term] id: DPO:000670 name: DNA-repair protein complementing XP-A cells region 3 namespace: region def: "." [DPO:curators, PMID:9699634, PMID:10050037] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017493 ! DNA repair protein complementing XP-A cells [Term] id: DPO:000671 name: DNA-repair protein complementing XP-A cells region 4 namespace: region def: "." [DPO:curators, PMID:9699634, PMID:10050037] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000017493 ! DNA repair protein complementing XP-A cells [Term] id: DPO:000672 name: DNA-repair protein complementing XP-A cells region 5 namespace: region def: "." [DPO:curators, PMID:9699634, PMID:10050037] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000017493 ! DNA repair protein complementing XP-A cells [Term] id: DPO:000673 name: DNA-repair protein complementing XP-A cells region 6 namespace: region def: "." [DPO:curators, PMID:9699634, PMID:10050037] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000017493 ! DNA repair protein complementing XP-A cells [Term] id: DPO:000674 name: cAMP-dependent protein kinase type I-alpha regulatory subunit region 1 namespace: region def: "." [DPO:curators, PMID:15692043, PMID:6487597] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000675 name: macrophage scavenger receptor types I and II [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:11785981] comment: The experimental sequence consisted of the first 50 residues of bovine MSR with a C17A substitution and a GC appended to the C-terminus. The C17A substitution has been shown to have no affect on the cell surface expression and endocytosis of MSR. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000676 name: probable transcriptional regulatory protein pdtaR region 1 namespace: region def: "." [DPO:curators, PMID:15341725] is_a: DPO:000007 ! disordered region [Term] id: DPO:000677 name: probable transcriptional regulatory protein pdtaR region 2 namespace: region def: "." [DPO:curators, PMID:15341725] is_a: DPO:000007 ! disordered region [Term] id: DPO:000678 name: probable transcriptional regulatory protein pdtaR region 3 namespace: region def: "." [DPO:curators, PMID:15341725] is_a: DPO:000007 ! disordered region [Term] id: DPO:000679 name: acylamino-acid-releasing enzyme region 1 namespace: region def: "." [DPO:curators, PMID:15296741] is_a: DPO:000007 ! disordered region [Term] id: DPO:000680 name: acylamino-acid-releasing enzyme region 2 namespace: region def: "." [DPO:curators, PMID:15296741] is_a: DPO:000007 ! disordered region [Term] id: DPO:000681 name: acylamino-acid-releasing enzyme region 3 namespace: region def: "." [DPO:curators, PMID:15296741] comment: This region is disordered when in a complex with p-nitrophenyl phosphate (pNP). is_a: DPO:000007 ! disordered region [Term] id: DPO:000682 name: troponin C, slow skeletal and cardiac muscles region 1 namespace: region def: "." [DPO:curators, PMID:2933134] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000683 name: cholera enterotoxin subunit A region 1 namespace: region def: "." [DPO:curators, PMID:15049684] comment: This region is disordered in crystal form 1. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000021962 ! cholera enterotoxin subunit A relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000684 name: cholera enterotoxin subunit A region 2 namespace: region def: "." [DPO:curators, PMID:15049684] comment: This region is disordered in crystal form 2. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000021962 ! cholera enterotoxin subunit A relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000685 name: cholera enterotoxin subunit A region 3 namespace: region def: "." [DPO:curators, PMID:15049684] comment: This region is disordered in crystal form 3. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000021962 ! cholera enterotoxin subunit A relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000686 name: epsin-1 region 1 namespace: region def: "." [DPO:curators, PMID:11756460] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000687 name: tryptophan synthase alpha chain region 1 namespace: region def: "." [DPO:curators, PMID:15667212] comment: These densities were unclear in molecule A only. The region stayed disordered when in a complex with molecule B. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000024117 ! tryptophan synthase alpha chain relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:000688 name: tryptophan synthase alpha chain region 2 namespace: region def: "." [DPO:curators, PMID:15667212] comment: These densities were unclear in molecules A and B. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000024117 ! tryptophan synthase alpha chain [Term] id: DPO:000689 name: tryptophan synthase alpha chain region 3 namespace: region def: "." [DPO:curators, PMID:15667212] comment: These densities are unclear in molecule B only. The region stayed disordered when in complex with molecule A. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000024117 ! tryptophan synthase alpha chain relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:000690 name: myristoylated alanine-rich C-kinase substrate region 1 namespace: region def: "." [DPO:curators, PMID:9468306, PMID:15640140] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010184 ! myristoylated alanine-rich C-kinase substrate relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000691 name: myristoylated alanine-rich C-kinase substrate region 2 namespace: region def: "." [DPO:curators, PMID:9468306, PMID:15640140] comment: This protein was found to be disordered while in a complex with calmodulin. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010184 ! myristoylated alanine-rich C-kinase substrate relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000692 name: protein tyrosine phosphatase type IVA 3 [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:14704153] is_a: DPO:000007 ! disordered region [Term] id: DPO:000693 name: protein tyrosine phosphatase type IVA 3 [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:14704153] is_a: DPO:000007 ! disordered region [Term] id: DPO:000694 name: protein tyrosine phosphatase type IVA 3 [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:14704153] is_a: DPO:000007 ! disordered region [Term] id: DPO:000695 name: protein tyrosine phosphatase type IVA 1 [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:15213447] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013440 ! protein tyrosine phosphatase type IVA 1 [Term] id: DPO:000696 name: protein tyrosine phosphatase type IVA 1 [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:15213447] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013440 ! protein tyrosine phosphatase type IVA 1 [Term] id: DPO:000697 name: protein tyrosine phosphatase type IVA 1 [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:15213447] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013440 ! protein tyrosine phosphatase type IVA 1 [Term] id: DPO:000698 name: securin region 1 namespace: region def: "." [DPO:curators, PMID:12220679] is_a: DPO:000007 ! disordered region [Term] id: DPO:000699 name: superoxide dismutase-like protein yojM region 1 namespace: region def: "." [DPO:curators, PMID:15897454] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000700 name: superoxide dismutase-like protein yojM region 2 namespace: region def: "." [DPO:curators, PMID:15897454] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000701 name: superoxide dismutase-like protein yojM region 3 namespace: region def: "." [DPO:curators, PMID:15897454] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000702 name: superoxide dismutase-like protein yojM region 4 namespace: region def: "." [DPO:curators, PMID:15897454] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000703 name: lysozyme C region 1 namespace: region def: "." [DPO:curators, PMID:1515108, PMID:15805597] is_a: DPO:000007 ! disordered region [Term] id: DPO:000704 name: lysozyme C region 2 namespace: region def: "." [DPO:curators, PMID:15805597] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000705 name: lysozyme C region 3 namespace: region def: "." [DPO:curators, PMID:15805597] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000706 name: lysozyme C region 4 namespace: region def: "." [DPO:curators, PMID:15805597] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000707 name: lysozyme C region 5 namespace: region def: "." [DPO:curators, PMID:15805597] is_a: DPO:000007 ! disordered region [Term] id: DPO:000708 name: myc proto-oncogene protein [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:15663936] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000000228 ! c-myc protein isoform 1 relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) [Term] id: DPO:000709 name: myc proto-oncogene protein [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:15663936] is_a: DPO:000010 ! disordered - molten globule region relationship: part_of PRO:000000228 ! c-myc protein isoform 1 relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000055 ! molten globule state [Term] id: DPO:000710 name: myc proto-oncogene protein [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:8755740, PMID:15663936] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000000228 ! c-myc protein isoform 1 relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000711 name: sialidase-2 region 1 namespace: region def: "." [DPO:curators, PMID:15501818] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011146 ! sialidase-2 relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000712 name: sialidase-2 region 2 namespace: region def: "." [DPO:curators, PMID:15501818] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011146 ! sialidase-2 relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000713 name: hypoxia-inducible factor 1 alpha [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:15629713] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000714 name: hypoxia-inducible factor 1 alpha [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:15629713] is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000715 name: hypoxia-inducible factor 1 alpha [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:11959977] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000716 name: fatty acid-binding protein, intestinal region 1 namespace: region def: "." [DPO:curators, PMID:9063893] is_a: DPO:000007 ! disordered region [Term] id: DPO:000717 name: fatty acid-binding protein, intestinal region 2 namespace: region def: "." [DPO:curators, PMID:9063893] is_a: DPO:000007 ! disordered region [Term] id: DPO:000718 name: major prion protein region 1 namespace: region def: "." [DPO:curators, PMID:9280298] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001886 ! major prion protein [Term] id: DPO:000719 name: potassium voltage-gated channel protein Shaker [Isoform E] region 1 namespace: region def: "." [DPO:curators, PMID:2122519] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000028 ! entropic clock relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000720 name: DE-cadherin region 1 namespace: region def: "." [DPO:curators, PMID:11121423, PMID:7958432] is_a: DPO:000007 ! disordered region [Term] id: DPO:000721 name: **Fab DNA-1** region 1 namespace: region def: "." [DPO:curators, PMID:15784256] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000722 name: **Fab DNA-1** region 2 namespace: region def: "." [DPO:curators, PMID:7506692, PMID:15784256] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000723 name: rhodopsin region 1 namespace: region def: "." [DPO:curators, PMID:10926528] is_a: DPO:000007 ! disordered region [Term] id: DPO:000724 name: rhodopsin region 2 namespace: region def: "." [DPO:curators, PMID:10926528] is_a: DPO:000007 ! disordered region [Term] id: DPO:000725 name: rhodopsin region 3 namespace: region def: "." [DPO:curators, PMID:10926528] is_a: DPO:000007 ! disordered region [Term] id: DPO:000726 name: rhodopsin region 4 namespace: region def: "." [DPO:curators, PMID:10926528] is_a: DPO:000007 ! disordered region [Term] id: DPO:000727 name: rhodopsin region 5 namespace: region def: "." [DPO:curators, PMID:10926528] is_a: DPO:000007 ! disordered region [Term] id: DPO:000728 name: mu-type opioid receptor [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:15680247] comment: The fragment used for structure determination contained residues 97-176 of the human µR. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector [Term] id: DPO:000729 name: guanine nucleotide-binding protein G(t) subunit alpha-1 region 1 namespace: region def: "." [DPO:curators, PMID:9539726] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:000730 name: collagen alpha-1(II) chain [Isoform 2] region 1 namespace: region def: "." [DPO:curators, PMID:15466413] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000731 name: yersinia crystallin region 1 namespace: region def: "." [DPO:curators, PMID:15536081] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000013 ! metal sponge relationship: has_subfunction DPO:000034 ! metal binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000732 name: yersinia crystallin region 2 namespace: region def: "." [DPO:curators, PMID:15536081, PMID:16470515] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000013 ! metal sponge relationship: has_subfunction DPO:000034 ! metal binding [Term] id: DPO:000733 name: membrane fusion protein p14 region 1 namespace: region def: "." [DPO:curators, PMID:15448165] comment: This region contains an extended "loop structure" comprising residues Pro5 to Pro13. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000734 name: membrane fusion protein p14 region 2 namespace: region def: "." [DPO:curators, PMID:15448165] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000735 name: cytochrome c oxidase copper chaperone region 1 namespace: region def: "." [DPO:curators, PMID:15465825] comment: This is the Cox17 protein in the apo form is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000736 name: cytochrome c oxidase copper chaperone region 2 namespace: region def: "." [DPO:curators, PMID:15465825] comment: This is the Cox17 protein in complex with copper. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000737 name: cytochrome c oxidase copper chaperone region 3 namespace: region def: "." [DPO:curators, PMID:15465825] comment: This is the Cox17 protein is its apo form. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000738 name: cytochrome c oxidase copper chaperone region 4 namespace: region def: "." [DPO:curators, PMID:15465825] comment: This is the Cox17 protein in complex with copper. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000739 name: gap junction alpha-1 protein region 1 namespace: region def: "." [DPO:curators, PMID:15492000, PMID:14699011, PMID:12151412, PMID:15284189] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000740 name: gap junction alpha-1 protein region 2 namespace: region def: "." [DPO:curators, PMID:15492000, PMID:14699011, PMID:12151412, PMID:15284189] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000741 name: gap junction alpha-1 protein region 3 namespace: region def: "." [DPO:curators, PMID:15492000, PMID:14699011, PMID:12151412, PMID:15284189] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000742 name: olfactory marker protein region 1 namespace: region def: "." [DPO:curators, PMID:16008352] is_a: DPO:000007 ! disordered region [Term] id: DPO:000743 name: olfactory marker protein region 2 namespace: region def: "." [DPO:curators, PMID:16008352] is_a: DPO:000007 ! disordered region [Term] id: DPO:000744 name: olfactory marker protein region 3 namespace: region def: "." [DPO:curators, PMID:16008352] is_a: DPO:000007 ! disordered region [Term] id: DPO:000745 name: perfringolysin O region 1 namespace: region def: "." [DPO:curators, PMID:15797734, PMID:10555145] comment: The six alpha-helices in domain 3 undergo a conformational change into two beta-hairpins that span the membrane. This order to order transition proceeds through a disordered intermediate. is_a: DPO:000007 ! disordered region [Term] id: DPO:000746 name: perfringolysin O region 2 namespace: region def: "." [DPO:curators, PMID:15797734, PMID:10555145] comment: The six alpha-helices in domain 3 undergo a conformational change into two beta-hairpins that span the membrane. This order to order transition proceeds through a disordered intermediate. is_a: DPO:000007 ! disordered region [Term] id: DPO:000747 name: copper-transporting ATPase 1 [Isoform 4] region 1 namespace: region def: "." [DPO:curators, PMID:14572476] comment: A single point mutation of MNKr2 was created with a F72I substitution, as discussed in the Jones et al. article. is_a: DPO:000007 ! disordered region [Term] id: DPO:000748 name: copper-transporting ATPase 1 [Isoform 4] region 2 namespace: region def: "." [DPO:curators, PMID:15035611, PMID:14572476] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000749 name: copper-transporting ATPase 1 [Isoform 4] region 3 namespace: region def: "." [DPO:curators, PMID:14572476] comment: A single point mutation of MNKr2 was created with a F72I substitution, as discussed in the Jones et al. article. is_a: DPO:000007 ! disordered region [Term] id: DPO:000750 name: **Tail-associated lysozyme** region 1 namespace: region def: "." [DPO:curators, PMID:15701513] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding [Term] id: DPO:000751 name: glutenin, high molecular weight subunit DX5 region 1 namespace: region def: "." [DPO:curators, PMID:12741823] is_a: DPO:000009 ! disordered - pre-molten globule region [Term] id: DPO:000752 name: von Hippel-Lindau disease tumor suppressor [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:14963040] comment: The physiological role of pVHL is not fully understood. However, it is suggested to play a role in protein degradation in the ubiquitin pathway and to be a regulator of multiple transcription pathways. is_a: DPO:000010 ! disordered - molten globule region relationship: has_structural_basis_for_function DPO:000055 ! molten globule state [Term] id: DPO:000753 name: prevent host death protein region 1 namespace: region def: "." [DPO:curators, PMID:9915794] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000754 name: EntI protein region 1 namespace: region def: "." [DPO:curators, PMID:12832790, PMID:15753083] comment: This region was disordered in chain A of the native molecule. is_a: DPO:000007 ! disordered region [Term] id: DPO:000755 name: EntI protein region 2 namespace: region def: "." [DPO:curators, PMID:12832790, PMID:15753083] comment: This region was disordered in chain A of the native molecule. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000756 name: EntI protein region 3 namespace: region def: "." [DPO:curators, PMID:12832790, PMID:15753083] comment: This region was disordered in chain B of the native molecule. is_a: DPO:000007 ! disordered region [Term] id: DPO:000757 name: EntI protein region 4 namespace: region def: "." [DPO:curators, PMID:12832790, PMID:15753083] comment: This region was disordered in chain B of the native molecule. is_a: DPO:000007 ! disordered region [Term] id: DPO:000758 name: EntI protein region 5 namespace: region def: "." [DPO:curators, PMID:12832790, PMID:15753083] comment: This region was disordered in chain C of the native molecule. is_a: DPO:000007 ! disordered region [Term] id: DPO:000759 name: EntI protein region 6 namespace: region def: "." [DPO:curators, PMID:12832790, PMID:15753083] comment: This region was disordered in chain C of the native molecule. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000760 name: EntI protein region 7 namespace: region def: "." [DPO:curators, PMID:15753083] is_a: DPO:000007 ! disordered region [Term] id: DPO:000761 name: EntI protein region 8 namespace: region def: "." [DPO:curators, PMID:15753083] is_a: DPO:000007 ! disordered region [Term] id: DPO:000762 name: EscJ region 1 namespace: region def: "." [DPO:curators, PMID:15752191] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000763 name: calsenilin [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:15746104] comment: DREAM-C is a mutant containing residues 65-256 of the full length protein, and contains the mutant residues D150N, E186Q, and E234Q. is_a: DPO:000010 ! disordered - molten globule region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000764 name: phosphorelay protein luxU region 1 namespace: region def: "." [DPO:curators, PMID:15740742] is_a: DPO:000007 ! disordered region [Term] id: DPO:000765 name: phosphorelay protein luxU region 2 namespace: region def: "." [DPO:curators, PMID:15740742] is_a: DPO:000007 ! disordered region [Term] id: DPO:000766 name: phosphorelay protein luxU region 3 namespace: region def: "." [DPO:curators, PMID:15740742] is_a: DPO:000007 ! disordered region [Term] id: DPO:000767 name: phosphorelay protein luxU region 4 namespace: region def: "." [DPO:curators, PMID:15740742] is_a: DPO:000007 ! disordered region [Term] id: DPO:000768 name: methyl-accepting chemotaxis protein II region 1 namespace: region def: "." [DPO:curators, PMID:15774032] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000024026 ! methyl-accepting chemotaxis protein II relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000769 name: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase region 1 namespace: region def: "." [DPO:curators, PMID:15735341] comment: This region was disordered in chain A. This region contained an additional C-terminal His tag that was composed of the following residues: GVPRGAAALEHHHHHH. These residues were also found to be disordered in the experiment. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000770 name: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase region 2 namespace: region def: "." [DPO:curators, PMID:15735341] comment: This region was disordered in chain B. This region contained an additional C-terminal His tag that was composed of the following residues: GVPRGAAALEHHHHHH. These residues were also found to be disordered in the experiment. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000771 name: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase region 3 namespace: region def: "." [DPO:curators, PMID:15735341] comment: This region was disordered in chain C. This region contained an additional C-terminal His tag that was composed of the following residues: GVPRGAAALEHHHHHH. These residues were also found to be disordered in the experiment. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000772 name: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase region 4 namespace: region def: "." [DPO:curators, PMID:15735341] comment: This region was disordered in chain D. This region contained an additional C-terminal His tag that was composed of the following residues: GVPRGAAALEHHHHHH. These residues were also found to be disordered in the experiment. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000773 name: PemI-like protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:12743116, PMID:15735309] comment: This region is disordered while complexed with the protein fragment VHH. is_a: DPO:000007 ! disordered region [Term] id: DPO:000774 name: PemI-like protein 1 region 2 namespace: region def: "." [DPO:curators, PMID:15735309, PMID:12743116] comment: The PDB files have this region starting at R48. This region is disordered while complexed with the protein fragment VHH. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_structural_basis_for_function DPO:000066 ! disorder to molten globule transition [Term] id: DPO:000775 name: PemI-like protein 1 region 3 namespace: region def: "." [DPO:curators, PMID:12718874, PMID:15735309] comment: This region is disordered while complexed with the protein MazF. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_structural_basis_for_function DPO:000066 ! disorder to molten globule transition [Term] id: DPO:000776 name: apoptosis regulator Bcl-2 region 1 namespace: region def: "." [DPO:curators, PMID:15733859] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002307 ! apoptosis regulator Bcl-2 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000777 name: bcl-2-like protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:8692274] comment: The PDB file 1R2G has this region being disordered from S28 to I81. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002308 ! Bcl-2-like protein 1 [Term] id: DPO:000778 name: bcl-2-like protein 1 region 2 namespace: region def: "." [DPO:curators, PMID:8692274] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002308 ! Bcl-2-like protein 1 [Term] id: DPO:000779 name: bcl-2-like protein 1 region 3 namespace: region def: "." [DPO:curators, PMID:14534311] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002308 ! Bcl-2-like protein 1 [Term] id: DPO:000780 name: bcl-2-like protein 1 region 4 namespace: region def: "." [DPO:curators, PMID:14534311] comment: This disordered region contains an extra poly-histine tail at the C-terminus of the fragment that was added in the experiment to facilitate purification. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002308 ! Bcl-2-like protein 1 [Term] id: DPO:000781 name: bcl-2-like protein 1 region 5 namespace: region def: "." [DPO:curators, PMID:14534311] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002308 ! Bcl-2-like protein 1 [Term] id: DPO:000782 name: bcl-2-like protein 1 region 6 namespace: region def: "." [DPO:curators, PMID:14534311] comment: This disordered region contains an extra poly-histine tail at the C-terminus of the fragment that was added in the experiment to facilitate purification. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002308 ! Bcl-2-like protein 1 [Term] id: DPO:000783 name: PemK-like protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:12718874] comment: Molecule B is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022284 ! pemK-like protein 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000784 name: PemK-like protein 1 region 2 namespace: region def: "." [DPO:curators, PMID:12718874] comment: Molecule A is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022284 ! pemK-like protein 1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000785 name: PemK-like protein 1 region 3 namespace: region def: "." [DPO:curators, PMID:12718874] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022284 ! pemK-like protein 1 [Term] id: DPO:000786 name: methyl-accepting chemotaxis protein I region 1 namespace: region def: "." [DPO:curators, PMID:15774032] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000024134 ! methyl-accepting chemotaxis protein I relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000787 name: dihydrofolate reductase region 1 namespace: region def: "." [DPO:curators, PMID:14717591, PMID:9012674] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000788 name: dihydrofolate reductase region 2 namespace: region def: "." [DPO:curators, PMID:14717591, PMID:9012674] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000789 name: dihydrofolate reductase region 3 namespace: region def: "." [DPO:curators, PMID:14717591, PMID:9012674] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000790 name: dihydrofolate reductase region 4 namespace: region def: "." [DPO:curators, PMID:9012674, PMID:14717591] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000791 name: dihydrofolate reductase region 5 namespace: region def: "." [DPO:curators, PMID:9012674, PMID:14717591] comment: PDB ID 5DFR had V10, L28, E120, D122, and D127 containing disordered side chains. PDB ID 6DFR had the side chains beyond the CB of E120 and D127 being disordered. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000792 name: dihydrofolate reductase region 6 namespace: region def: "." [DPO:curators, PMID:9012674, PMID:14717591] is_a: DPO:000007 ! disordered region [Term] id: DPO:000793 name: dihydrofolate reductase region 7 namespace: region def: "." [DPO:curators, PMID:9012674, PMID:14717591] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000794 name: putative stringent starvation protein A region 1 namespace: region def: "." [DPO:curators, PMID:15735307] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) [Term] id: DPO:000795 name: putative stringent starvation protein A region 2 namespace: region def: "." [DPO:curators, PMID:15735307] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000796 name: putative stringent starvation protein A region 3 namespace: region def: "." [DPO:curators, PMID:15735307] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) [Term] id: DPO:000797 name: myoglobin region 1 namespace: region def: "." [DPO:curators, PMID:8844864, PMID:12079388] comment: This region becomes disordered between a pressure change of 500 and 1200 bar. is_a: DPO:000007 ! disordered region [Term] id: DPO:000798 name: myoglobin region 2 namespace: region def: "." [DPO:curators, PMID:8844864, PMID:12079388] comment: This region becomes disordered between a pressure change of 500 and 1200 bar. is_a: DPO:000007 ! disordered region [Term] id: DPO:000799 name: myoglobin region 3 namespace: region def: "." [DPO:curators, PMID:8844864, PMID:12079388] comment: This region is the only disordered region for the natively folded protein when at a pressure of 30 bar. is_a: DPO:000007 ! disordered region [Term] id: DPO:000800 name: myoglobin region 4 namespace: region def: "." [DPO:curators, PMID:12079388, PMID:8844864] comment: This region becomes disordered between a pressure change of 500 and 1200 bar. is_a: DPO:000007 ! disordered region [Term] id: DPO:000801 name: myoglobin region 5 namespace: region def: "." [DPO:curators, PMID:12079388, PMID:8844864] is_a: DPO:000007 ! disordered region [Term] id: DPO:000802 name: myoglobin region 6 namespace: region def: "." [DPO:curators, PMID:12079388, PMID:8844864] comment: This region becomes disordered between a pressure change of 500 and 1200 bar. is_a: DPO:000007 ! disordered region [Term] id: DPO:000803 name: myoglobin region 7 namespace: region def: "." [DPO:curators, PMID:12079388, PMID:8844864] comment: The entire protein forms into a molten globule conformation at a pressure of 2000 bar. is_a: DPO:000007 ! disordered region [Term] id: DPO:000804 name: myoglobin region 8 namespace: region def: "." [DPO:curators, PMID:12079388, PMID:8844864] comment: The entire protein forms into an extended, disordered conformation at a pressure of 3000 bar. is_a: DPO:000008 ! disordered - extended region [Term] id: DPO:000805 name: RAC-beta serine/threonine-protein kinase region 1 namespace: region def: "." [DPO:curators, PMID:12086620] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000806 name: RAC-beta serine/threonine-protein kinase region 2 namespace: region def: "." [DPO:curators, PMID:12086620] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000807 name: RAC-beta serine/threonine-protein kinase region 3 namespace: region def: "." [DPO:curators, PMID:12086620] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000808 name: RAC-beta serine/threonine-protein kinase region 4 namespace: region def: "." [DPO:curators, PMID:12086620] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000809 name: RAC-beta serine/threonine-protein kinase region 5 namespace: region def: "." [DPO:curators, PMID:12517337] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000810 name: RAC-beta serine/threonine-protein kinase region 6 namespace: region def: "." [DPO:curators, PMID:12517337] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000811 name: RAC-beta serine/threonine-protein kinase region 7 namespace: region def: "." [DPO:curators, PMID:12517337] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000812 name: RAC-beta serine/threonine-protein kinase region 8 namespace: region def: "." [DPO:curators, PMID:12517337] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000813 name: RAC-beta serine/threonine-protein kinase region 9 namespace: region def: "." [DPO:curators, PMID:12517337] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000814 name: RAC-beta serine/threonine-protein kinase region 10 namespace: region def: "." [DPO:curators, PMID:12517337] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000815 name: RAC-beta serine/threonine-protein kinase region 11 namespace: region def: "." [DPO:curators, PMID:12517337] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003912 ! RAC-beta serine/threonine-protein kinase [Term] id: DPO:000816 name: carnitine O-acetyltransferase [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:12562770] comment: The PDB file has an additional sequence of missing residues at the C terminus of this disordered region. It consists of the following residues: ISEEDLSLISG. is_a: DPO:000007 ! disordered region [Term] id: DPO:000817 name: early activation antigen CD69 region 1 namespace: region def: "." [DPO:curators, PMID:11101293] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001343 ! early activation antigen CD69 [Term] id: DPO:000818 name: cyclin-H region 1 namespace: region def: "." [DPO:curators, PMID:8941715] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005130 ! cyclin-H [Term] id: DPO:000819 name: cyclin-H region 2 namespace: region def: "." [DPO:curators, PMID:8941715] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005130 ! cyclin-H [Term] id: DPO:000820 name: uroporphyrinogen decarboxylase region 1 namespace: region def: "." [DPO:curators, PMID:11719352] comment: This disordered region contains the first 9 amino acids of the SwissProt sequence, and does not include the N-terminal tag as found in the PDB file and both references. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017134 ! uroporphyrinogen decarboxylase [Term] id: DPO:000821 name: uroporphyrinogen decarboxylase region 2 namespace: region def: "." [DPO:curators, PMID:11719352, PMID:9564029] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017134 ! uroporphyrinogen decarboxylase [Term] id: DPO:000822 name: uroporphyrinogen decarboxylase region 4 namespace: region def: "." [DPO:curators, PMID:9564029] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017134 ! uroporphyrinogen decarboxylase [Term] id: DPO:000823 name: epidermal growth factor receptor [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:12196540] is_a: DPO:000007 ! disordered region [Term] id: DPO:000824 name: epidermal growth factor receptor [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:12196540] is_a: DPO:000007 ! disordered region [Term] id: DPO:000825 name: epidermal growth factor receptor [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:12196540] is_a: DPO:000007 ! disordered region [Term] id: DPO:000826 name: eukaryotic peptide chain release factor subunit 1 region 1 namespace: region def: "." [DPO:curators, PMID:10676813] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007214 ! eukaryotic peptide chain release factor subunit 1 [Term] id: DPO:000827 name: eukaryotic peptide chain release factor subunit 1 region 2 namespace: region def: "." [DPO:curators, PMID:10676813] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007214 ! eukaryotic peptide chain release factor subunit 1 [Term] id: DPO:000828 name: eukaryotic peptide chain release factor subunit 1 region 3 namespace: region def: "." [DPO:curators, PMID:10676813] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007214 ! eukaryotic peptide chain release factor subunit 1 [Term] id: DPO:000829 name: eukaryotic peptide chain release factor subunit 1 region 4 namespace: region def: "." [DPO:curators, PMID:10676813] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007214 ! eukaryotic peptide chain release factor subunit 1 [Term] id: DPO:000830 name: immunoglobulin alpha Fc receptor [Isoform A.1] region 1 namespace: region def: "." [DPO:curators, PMID:12783876] is_a: DPO:000007 ! disordered region [Term] id: DPO:000831 name: immunoglobulin alpha Fc receptor [Isoform A.1] region 2 namespace: region def: "." [DPO:curators, PMID:12783876] is_a: DPO:000007 ! disordered region [Term] id: DPO:000832 name: immunoglobulin alpha Fc receptor [Isoform A.1] region 3 namespace: region def: "." [DPO:curators, PMID:12783876] is_a: DPO:000007 ! disordered region [Term] id: DPO:000833 name: FL cytokine receptor region 1 namespace: region def: "." [DPO:curators, PMID:14759363] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002001 ! FL cytokine receptor [Term] id: DPO:000834 name: FL cytokine receptor region 2 namespace: region def: "." [DPO:curators, PMID:14759363] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002001 ! FL cytokine receptor [Term] id: DPO:000835 name: FL cytokine receptor region 3 namespace: region def: "." [DPO:curators, PMID:14759363] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002001 ! FL cytokine receptor [Term] id: DPO:000836 name: FL cytokine receptor region 4 namespace: region def: "." [DPO:curators, PMID:14759363] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002001 ! FL cytokine receptor [Term] id: DPO:000837 name: interferon-induced guanylate-binding protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:10676968] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007874 ! interferon-induced guanylate-binding protein 1 [Term] id: DPO:000838 name: interferon-induced guanylate-binding protein 1 region 2 namespace: region def: "." [DPO:curators, PMID:10676968] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007874 ! interferon-induced guanylate-binding protein 1 [Term] id: DPO:000839 name: interferon-induced guanylate-binding protein 1 region 3 namespace: region def: "." [DPO:curators, PMID:10676968] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007874 ! interferon-induced guanylate-binding protein 1 [Term] id: DPO:000840 name: interferon-induced guanylate-binding protein 1 region 4 namespace: region def: "." [DPO:curators, PMID:10676968] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007874 ! interferon-induced guanylate-binding protein 1 [Term] id: DPO:000841 name: interferon-induced guanylate-binding protein 1 region 5 namespace: region def: "." [DPO:curators, PMID:10676968] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007874 ! interferon-induced guanylate-binding protein 1 [Term] id: DPO:000842 name: interferon-induced guanylate-binding protein 1 region 6 namespace: region def: "." [DPO:curators, PMID:10676968] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007874 ! interferon-induced guanylate-binding protein 1 [Term] id: DPO:000843 name: ADP-ribosylation factor-binding protein GGA1 [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:12668765] comment: The PDB file contains an additional 5 amino acid insert consisting of GAMGS at the N-terminus of this region. is_a: DPO:000007 ! disordered region [Term] id: DPO:000844 name: ADP-ribosylation factor-binding protein GGA1 [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:12668765] is_a: DPO:000007 ! disordered region [Term] id: DPO:000845 name: ADP-ribosylation factor-binding protein GGA1 [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:12668765] is_a: DPO:000007 ! disordered region [Term] id: DPO:000846 name: ADP-ribosylation factor-binding protein GGA1 [Isoform 1] region 4 namespace: region def: "." [DPO:curators, PMID:12679809] is_a: DPO:000007 ! disordered region [Term] id: DPO:000847 name: ADP-ribosylation factor-binding protein GGA1 [Isoform 1] region 5 namespace: region def: "." [DPO:curators, PMID:12679809] is_a: DPO:000007 ! disordered region [Term] id: DPO:000848 name: ADP-ribosylation factor-binding protein GGA1 [Isoform 1] region 6 namespace: region def: "." [DPO:curators, PMID:12767220] is_a: DPO:000007 ! disordered region [Term] id: DPO:000849 name: ADP-ribosylation factor-binding protein GGA1 [Isoform 1] region 7 namespace: region def: "." [DPO:curators, PMID:12767220] is_a: DPO:000007 ! disordered region [Term] id: DPO:000850 name: serine protease HTRA2, mitochondrial [Isoform 1 (13B)] region 1 namespace: region def: "." [DPO:curators, PMID:11967569] is_a: DPO:000007 ! disordered region [Term] id: DPO:000851 name: serine protease HTRA2, mitochondrial [Isoform 1 (13B)] region 2 namespace: region def: "." [DPO:curators, PMID:11967569] is_a: DPO:000007 ! disordered region [Term] id: DPO:000852 name: serine protease HTRA2, mitochondrial [Isoform 1 (13B)] region 3 namespace: region def: "." [DPO:curators, PMID:11967569] is_a: DPO:000007 ! disordered region [Term] id: DPO:000853 name: hepatocyte growth factor receptor [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:14559966] is_a: DPO:000007 ! disordered region [Term] id: DPO:000854 name: hepatocyte growth factor receptor [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:14559966] is_a: DPO:000007 ! disordered region [Term] id: DPO:000855 name: hepatocyte growth factor receptor [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:14559966] is_a: DPO:000007 ! disordered region [Term] id: DPO:000856 name: hepatocyte growth factor receptor [Isoform 1] region 4 namespace: region def: "." [DPO:curators, PMID:14559966] is_a: DPO:000007 ! disordered region [Term] id: DPO:000857 name: hepatocyte growth factor receptor [Isoform 1] region 5 namespace: region def: "." [DPO:curators, PMID:15167892] is_a: DPO:000007 ! disordered region [Term] id: DPO:000858 name: hepatocyte growth factor receptor [Isoform 1] region 6 namespace: region def: "." [DPO:curators, PMID:15167892] is_a: DPO:000007 ! disordered region [Term] id: DPO:000859 name: hepatocyte growth factor receptor [Isoform 1] region 7 namespace: region def: "." [DPO:curators, PMID:15167892] is_a: DPO:000007 ! disordered region [Term] id: DPO:000860 name: hepatocyte growth factor receptor [Isoform 1] region 8 namespace: region def: "." [DPO:curators, PMID:15167892] is_a: DPO:000007 ! disordered region [Term] id: DPO:000861 name: hepatocyte growth factor receptor [Isoform 1] region 9 namespace: region def: "." [DPO:curators, PMID:15167892] is_a: DPO:000007 ! disordered region [Term] id: DPO:000862 name: nuclear pore complex protein Nup133 region 1 namespace: region def: "." [DPO:curators, PMID:15557116] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011507 ! nuclear pore complex protein Nup133 [Term] id: DPO:000863 name: nuclear pore complex protein Nup133 region 2 namespace: region def: "." [DPO:curators, PMID:15557116] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011507 ! nuclear pore complex protein Nup133 [Term] id: DPO:000864 name: nuclear pore complex protein Nup133 region 3 namespace: region def: "." [DPO:curators, PMID:15557116] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011507 ! nuclear pore complex protein Nup133 [Term] id: DPO:000865 name: nuclear pore complex protein Nup133 region 4 namespace: region def: "." [DPO:curators, PMID:15557116] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011507 ! nuclear pore complex protein Nup133 [Term] id: DPO:000866 name: nuclear pore complex protein Nup133 region 5 namespace: region def: "." [DPO:curators, PMID:15557116] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011507 ! nuclear pore complex protein Nup133 [Term] id: DPO:000867 name: tumor protein p73 [Isoform Alpha] region 1 namespace: region def: "." [DPO:curators, PMID:11264583] is_a: DPO:000007 ! disordered region [Term] id: DPO:000868 name: tumor protein p73 [Isoform Alpha] region 2 namespace: region def: "." [DPO:curators, PMID:11264583] is_a: DPO:000007 ! disordered region [Term] id: DPO:000869 name: plasminogen activator inhibitor 1 region 1 namespace: region def: "." [DPO:curators, PMID:7664104] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000014702 ! plasminogen activator inhibitor 1 [Term] id: DPO:000870 name: protein-arginine deiminase type-4 region 1 namespace: region def: "." [DPO:curators, PMID:15247907] comment: According to the PDB fle, this region had an additional 7 amino acid tag on the N-terminal end consisting of GPLGSPQ. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000871 name: protein-arginine deiminase type-4 region 2 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000872 name: protein-arginine deiminase type-4 region 3 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000873 name: protein-arginine deiminase type-4 region 4 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000874 name: protein-arginine deiminase type-4 region 5 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000875 name: protein-arginine deiminase type-4 region 6 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000876 name: protein-arginine deiminase type-4 region 7 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000877 name: protein-arginine deiminase type-4 region 8 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000878 name: protein-arginine deiminase type-4 region 9 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000879 name: protein-arginine deiminase type-4 region 10 namespace: region def: "." [DPO:curators, PMID:15247907] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012222 ! protein-arginine deiminase type-4 [Term] id: DPO:000880 name: proto-oncogene serine/threonine-protein kinase Pim-1 [Isoform 2] region 1 namespace: region def: "." [DPO:curators, PMID:15525646] is_a: DPO:000007 ! disordered region [Term] id: DPO:000881 name: proto-oncogene serine/threonine-protein kinase Pim-1 [Isoform 2] region 2 namespace: region def: "." [DPO:curators, PMID:15525646] is_a: DPO:000007 ! disordered region [Term] id: DPO:000882 name: nuclear receptor subfamily 1 group I member 2 [Isoform 1A (1)(PRR1-A)] region 1 namespace: region def: "." [DPO:curators, PMID:11408620] comment: There is an additional 11 amino acids in the disordered region based upon the PDB sequence. The sequence is as follows: MKKGHHHHHHG. It is located from residue 119 to 129. is_a: DPO:000007 ! disordered region [Term] id: DPO:000883 name: nuclear receptor subfamily 1 group I member 2 [Isoform 1A (1)(PRR1-A)] region 2 namespace: region def: "." [DPO:curators, PMID:11408620] is_a: DPO:000007 ! disordered region [Term] id: DPO:000884 name: nuclear receptor subfamily 1 group I member 2 [Isoform 1A (1)(PRR1-A)] region 3 namespace: region def: "." [DPO:curators, PMID:11408620] is_a: DPO:000007 ! disordered region [Term] id: DPO:000885 name: heterogeneous nuclear ribonucleoprotein A1 [Isoform A1-B] region 1 namespace: region def: "." [DPO:curators, PMID:11917013] is_a: DPO:000007 ! disordered region [Term] id: DPO:000886 name: heterogeneous nuclear ribonucleoprotein A1 [Isoform A1-B] region 2 namespace: region def: "." [DPO:curators, PMID:11917013] is_a: DPO:000007 ! disordered region [Term] id: DPO:000887 name: heterogeneous nuclear ribonucleoprotein A1 [Isoform A1-B] region 3 namespace: region def: "." [DPO:curators, PMID:11917013] is_a: DPO:000007 ! disordered region [Term] id: DPO:000888 name: protein phosphatase 1 regulatory subunit 1A region 1 namespace: region def: "." [DPO:curators, PMID:208844] is_a: DPO:000007 ! disordered region [Term] id: DPO:000889 name: DNA ligase region 1 namespace: region def: "." [DPO:curators, PMID:15296738] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000890 name: phytanoyl-CoA dioxygenase, peroxisomal region 1 namespace: region def: "." [DPO:curators, PMID:16186124] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012674 ! phytanoyl-CoA dioxygenase, peroxisomal [Term] id: DPO:000891 name: phytanoyl-CoA dioxygenase, peroxisomal region 2 namespace: region def: "." [DPO:curators, PMID:16186124] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012674 ! phytanoyl-CoA dioxygenase, peroxisomal [Term] id: DPO:000892 name: phytanoyl-CoA dioxygenase, peroxisomal region 3 namespace: region def: "." [DPO:curators, PMID:16186124] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012674 ! phytanoyl-CoA dioxygenase, peroxisomal relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000893 name: phytanoyl-CoA dioxygenase, peroxisomal region 4 namespace: region def: "." [DPO:curators, PMID:16186124] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012674 ! phytanoyl-CoA dioxygenase, peroxisomal relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000894 name: phytanoyl-CoA dioxygenase, peroxisomal region 5 namespace: region def: "." [DPO:curators, PMID:16186124] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012674 ! phytanoyl-CoA dioxygenase, peroxisomal relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000895 name: transcription factor GAGA [Isoform B] region 1 namespace: region def: "." [DPO:curators, PMID:9878427] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000896 name: transcription factor GAGA [Isoform B] region 2 namespace: region def: "." [DPO:curators, PMID:9878427] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding [Term] id: DPO:000897 name: transcription factor GAGA [Isoform B] region 3 namespace: region def: "." [DPO:curators, PMID:9878427] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding [Term] id: DPO:000898 name: beta-casein region 1 namespace: region def: "." [DPO:curators, PMID:8373815] is_a: DPO:000007 ! disordered region [Term] id: DPO:000899 name: beta-casein region 2 namespace: region def: "." [DPO:curators, PMID:7305393] is_a: DPO:000007 ! disordered region [Term] id: DPO:000900 name: alpha-S1-casein region 1 namespace: region def: "." [DPO:curators, PMID:7305393] is_a: DPO:000007 ! disordered region [Term] id: DPO:000901 name: bone sialoprotein 2 region 1 namespace: region def: "." [DPO:curators, PMID:11162539] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000008878 ! bone sialoprotein 2 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000902 name: calreticulin region 1 namespace: region def: "." [DPO:curators, PMID:11101311] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000004984 ! calreticulin [Term] id: DPO:000903 name: calreticulin region 2 namespace: region def: "." [DPO:curators, PMID:11101311] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004984 ! calreticulin [Term] id: DPO:000904 name: E3 ubiquitin-protein ligase Mdm2 [Isoform Mdm2] region 1 namespace: region def: "." [DPO:curators, PMID:11718560] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000905 name: E3 ubiquitin-protein ligase Mdm2 [Isoform Mdm2] region 2 namespace: region def: "." [DPO:curators, PMID:12630860] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000906 name: E3 ubiquitin-protein ligase Mdm2 [Isoform Mdm2] region 3 namespace: region def: "." [DPO:curators, PMID:15953616] is_a: DPO:000007 ! disordered region [Term] id: DPO:000907 name: cyclin-dependent kinase inhibitor 2A [Isoform 3] region 1 namespace: region def: "." [DPO:curators, PMID:11718560] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000908 name: cyclin-dependent kinase inhibitor 2A [Isoform 4] region 1 namespace: region def: "." [DPO:curators, PMID:11718560, PMID:12630860] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000909 name: deoxyuridine 5'-triphosphate nucleotidohydrolase region 1 namespace: region def: "." [DPO:curators, PMID:1311056] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022493 ! deoxyuridine 5'-triphosphate nucleotidohydrolase [Term] id: DPO:000910 name: deoxyuridine 5'-triphosphate nucleotidohydrolase region 2 namespace: region def: "." [DPO:curators, PMID:11257499] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022493 ! deoxyuridine 5'-triphosphate nucleotidohydrolase [Term] id: DPO:000911 name: histo-blood group B transferase region 1 namespace: region def: "." [DPO:curators, PMID:15987364] is_a: DPO:000007 ! disordered region [Term] id: DPO:000912 name: histo-blood group B transferase region 2 namespace: region def: "." [DPO:curators, PMID:15987364] is_a: DPO:000007 ! disordered region [Term] id: DPO:000913 name: histo-blood group A transferase region 1 namespace: region def: "." [DPO:curators, PMID:15987364] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003587 ! histo-blood group ABO system transferase [Term] id: DPO:000914 name: histo-blood group A transferase region 2 namespace: region def: "." [DPO:curators, PMID:15987364] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003587 ! histo-blood group ABO system transferase [Term] id: DPO:000915 name: catenin beta-1 region 1 namespace: region def: "." [DPO:curators, PMID:9298899] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002198 ! catenin beta-1 [Term] id: DPO:000916 name: catenin beta-1 region 2 namespace: region def: "." [DPO:curators, PMID:9298899] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002198 ! catenin beta-1 [Term] id: DPO:000917 name: catenin beta-1 region 3 namespace: region def: "." [DPO:curators, PMID:9298899] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002198 ! catenin beta-1 [Term] id: DPO:000918 name: catenin beta-1 region 4 namespace: region def: "." [DPO:curators, PMID:15629534] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002198 ! catenin beta-1 relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000919 name: colicin-E9 region 1 namespace: region def: "." [DPO:curators, PMID:12054823] comment: N-terminus responsible for translocation of the cytotoxic domain into the target cell. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000920 name: nuclear receptor coactivator 3 [Isoform 3, variant] region 1 namespace: region def: "." [DPO:curators, PMID:11823864] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000921 name: nuclear receptor coactivator 3 [Isoform 3, variant] region 2 namespace: region def: "." [DPO:curators, PMID:11823864] is_a: DPO:000007 ! disordered region [Term] id: DPO:000922 name: nuclear receptor coactivator 3 [Isoform 3, variant] region 3 namespace: region def: "." [DPO:curators, PMID:11823864] is_a: DPO:000007 ! disordered region [Term] id: DPO:000923 name: leukotoxin region 1 namespace: region def: "." [DPO:curators, PMID:7703231] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000924 name: retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma region 1 namespace: region def: "." [DPO:curators, PMID:12643535] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000925 name: CREB-binding protein region 1 namespace: region def: "." [DPO:curators, PMID:11823864] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000000090 ! creb-binding protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000926 name: CREB-binding protein region 2 namespace: region def: "." [DPO:curators, PMID:11583620] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000000090 ! creb-binding protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:000927 name: CREB-binding protein region 3 namespace: region def: "." [DPO:curators, PMID:11823864] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000000090 ! creb-binding protein [Term] id: DPO:000928 name: bifunctional protein birA region 1 namespace: region def: "." [DPO:curators, PMID:11124029] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022227 ! bifunctional protein birA relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000929 name: bifunctional protein birA region 2 namespace: region def: "." [DPO:curators, PMID:1409631] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022227 ! bifunctional protein birA relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000930 name: bifunctional protein birA region 3 namespace: region def: "." [DPO:curators, PMID:10497026] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022227 ! bifunctional protein birA relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000931 name: bifunctional protein birA region 4 namespace: region def: "." [DPO:curators, PMID:11124029] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022227 ! bifunctional protein birA relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000932 name: bifunctional protein birA region 5 namespace: region def: "." [DPO:curators, PMID:10497026] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022227 ! bifunctional protein birA relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000933 name: bifunctional protein birA region 6 namespace: region def: "." [DPO:curators, PMID:11124029] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022227 ! bifunctional protein birA relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000934 name: bifunctional protein birA region 7 namespace: region def: "." [DPO:curators, PMID:10497026] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022227 ! bifunctional protein birA relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000935 name: bifunctional protein birA region 8 namespace: region def: "." [DPO:curators, PMID:1409631] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022227 ! bifunctional protein birA [Term] id: DPO:000936 name: chemotaxis protein cheW region 1 namespace: region def: "." [DPO:curators, PMID:11799399] is_a: DPO:000007 ! disordered region [Term] id: DPO:000937 name: chemotaxis protein cheW region 2 namespace: region def: "." [DPO:curators, PMID:11799399] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000938 name: chemotaxis protein cheW region 3 namespace: region def: "." [DPO:curators, PMID:11799399] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000939 name: chemotaxis protein cheW region 4 namespace: region def: "." [DPO:curators, PMID:11799399] is_a: DPO:000007 ! disordered region [Term] id: DPO:000940 name: chemotaxis protein cheW region 5 namespace: region def: "." [DPO:curators, PMID:11799399, PMID:12488014] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000941 name: chemotaxis protein cheW region 6 namespace: region def: "." [DPO:curators, PMID:11799399, PMID:12488014] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000942 name: chemotaxis protein cheW region 7 namespace: region def: "." [DPO:curators, PMID:12488014] is_a: DPO:000007 ! disordered region [Term] id: DPO:000943 name: putative tyrosine-protein phosphatase auxilin region 1 namespace: region def: "." [DPO:curators, PMID:12732633] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000944 name: glycyl-glycine endopeptidase lytM region 1 namespace: region def: "." [DPO:curators, PMID:16269153] comment: The fragment used to determine the crystal structure consisted of residues 185-316. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding [Term] id: DPO:000945 name: glycyl-glycine endopeptidase lytM region 2 namespace: region def: "." [DPO:curators, PMID:16269153] comment: The fragment used to determine the crystal structure consisted of residues 185-316. is_a: DPO:000007 ! disordered region [Term] id: DPO:000946 name: glycyl-glycine endopeptidase lytM region 3 namespace: region def: "." [DPO:curators, PMID:16269153] comment: The fragment used to determine the crystal structure consisted of residues 185-316. is_a: DPO:000007 ! disordered region [Term] id: DPO:000947 name: glycyl-glycine endopeptidase lytM region 4 namespace: region def: "." [DPO:curators, PMID:16269153] comment: The fragment used to determine the crystal structure consisted of residues 185-316. is_a: DPO:000007 ! disordered region [Term] id: DPO:000948 name: protein URE2 region 1 namespace: region def: "." [DPO:curators, PMID:10224139, PMID:11327838, PMID:15628874] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000949 name: fibronectin binding protein region 1 namespace: region def: "." [DPO:curators, PMID:15292204] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000950 name: apolipoprotein E region 1 namespace: region def: "." [DPO:curators, PMID:10850798, PMID:2063194] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004155 ! apolipoprotein E [Term] id: DPO:000951 name: apolipoprotein E region 2 namespace: region def: "." [DPO:curators, PMID:10850798, PMID:2063194] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004155 ! apolipoprotein E relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000042 ! protein-lipid interaction relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000952 name: apolipoprotein E region 3 namespace: region def: "." [DPO:curators, PMID:10850798, PMID:2063194] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004155 ! apolipoprotein E [Term] id: DPO:000953 name: Cbp/p300-interacting transactivator 2 [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:14594809] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000954 name: thymosin beta-4 region 1 namespace: region def: "." [DPO:curators, PMID:15039431, PMID:8269922] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000016463 ! thymosin beta-4 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000955 name: prostaglandin E synthase 3 region 1 namespace: region def: "." [DPO:curators, PMID:10543959] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013423 ! prostaglandin E synthase 3 relationship: has_function DPO:000011 ! chaperone relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:000956 name: prostaglandin E synthase 3 region 2 namespace: region def: "." [DPO:curators, PMID:10811660] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013423 ! prostaglandin E synthase 3 relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000957 name: calvin cycle protein CP12 region 1 namespace: region def: "." [DPO:curators, PMID:12846565, PMID:16259044, PMID:16427344] comment: The presence of copper cations catalyzes the re-formation of disulfide bonds in the reduced form of this protein. This in turn leads to the formation of the oxidized CP12, which can then bind a copper ion. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000017 ! molecular recognition scavenger relationship: has_subfunction DPO:000034 ! metal binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000958 name: calvin cycle protein CP12 region 2 namespace: region def: "." [DPO:curators, PMID:16259044, PMID:16427344, PMID:12846565] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000959 name: calvin cycle protein CP12 region 3 namespace: region def: "." [DPO:curators, PMID:12846565, PMID:16259044, PMID:16427344] is_a: DPO:000010 ! disordered - molten globule region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000960 name: cytoplasmic dynein 1 intermediate chain 1 [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:15581372, PMID:11914076, PMID:15051340] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000961 name: XO lethal protein 1 [Isoform b] region 1 namespace: region def: "." [DPO:curators, PMID:12672694] is_a: DPO:000007 ! disordered region [Term] id: DPO:000962 name: XO lethal protein 1 [Isoform b] region 2 namespace: region def: "." [DPO:curators, PMID:12672694] is_a: DPO:000007 ! disordered region [Term] id: DPO:000963 name: XO lethal protein 1 [Isoform b] region 3 namespace: region def: "." [DPO:curators, PMID:12672694] comment: Electron density was not visible for residues 190-195 in monomer 1, and residues 190-194 in monomer 2. is_a: DPO:000007 ! disordered region [Term] id: DPO:000964 name: UDP-N-acetylhexosamine pyrophosphorylase [Isoform AGX1] region 1 namespace: region def: "." [DPO:curators, PMID:11707391] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000965 name: GTP-binding protein Rheb region 1 namespace: region def: "." [DPO:curators, PMID:15728574] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013975 ! GTP-binding protein Rheb relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000966 name: serine/threonine protein phosphatase 5 region 1 namespace: region def: "." [DPO:curators, PMID:15713458] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013157 ! serine/threonine-protein phosphatase 5 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000058 ! molten globule to order transition [Term] id: DPO:000967 name: urease accessory protein UreG region 1 namespace: region def: "." [DPO:curators, PMID:15542602] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000011 ! chaperone relationship: has_subfunction DPO:000022 ! cofactor/heme binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000968 name: uncharacterized protein C8orf4 region 1 namespace: region def: "." [DPO:curators, PMID:15087392] is_a: DPO:000007 ! disordered region [Term] id: DPO:000969 name: penaeidin-3a region 1 namespace: region def: "." [DPO:curators, PMID:12842879] comment: The SwissProt sequence contained an additional 19 amino acids at the N-terminus of this protein that were not used in the Yang et al. paper. is_a: DPO:000007 ! disordered region [Term] id: DPO:000970 name: diphtheria toxin repressor region 1 namespace: region def: "." [DPO:curators, PMID:10339551] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000971 name: ProP effector region 1 namespace: region def: "." [DPO:curators, PMID:15476391] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023600 ! proP effector relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000972 name: methane monooxygenase component C region 1 namespace: region def: "." [DPO:curators, PMID:15379538] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:000973 name: methane monooxygenase component C region 2 namespace: region def: "." [DPO:curators, PMID:15379538] is_a: DPO:000007 ! disordered region [Term] id: DPO:000974 name: methane monooxygenase component C region 3 namespace: region def: "." [DPO:curators, PMID:15379538] is_a: DPO:000007 ! disordered region [Term] id: DPO:000975 name: putative carnobacteriocin-B2 immunity protein region 1 namespace: region def: "." [DPO:curators, PMID:15362858] is_a: DPO:000007 ! disordered region [Term] id: DPO:000976 name: aryl hydrocarbon receptor region 1 namespace: region def: "." [DPO:curators, PMID:15641800] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003858 ! aryl hydrocarbon receptor relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000977 name: ribonuclease P protein component 1 region 1 namespace: region def: "." [DPO:curators, PMID:15518563] is_a: DPO:000007 ! disordered region [Term] id: DPO:000978 name: ribonuclease P protein component 1 region 2 namespace: region def: "." [DPO:curators, PMID:15518563] is_a: DPO:000007 ! disordered region [Term] id: DPO:000979 name: aldehyde dehydrogenase, mitochondrial region 1 namespace: region def: "." [DPO:curators, PMID:15983043] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003925 ! aldehyde dehydrogenase, mitochondrial [Term] id: DPO:000980 name: aldehyde dehydrogenase, mitochondrial region 2 namespace: region def: "." [DPO:curators, PMID:15983043] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003925 ! aldehyde dehydrogenase, mitochondrial [Term] id: DPO:000981 name: aldehyde dehydrogenase, mitochondrial region 3 namespace: region def: "." [DPO:curators, PMID:15983043] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003925 ! aldehyde dehydrogenase, mitochondrial [Term] id: DPO:000982 name: glycogen synthase kinase-3 beta [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:11440715] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000021 ! autoregulatory [Term] id: DPO:000983 name: glycogen synthase kinase-3 beta [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:11440715] is_a: DPO:000007 ! disordered region [Term] id: DPO:000984 name: glycogen synthase kinase-3 beta [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:12554650] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000985 name: glycogen synthase kinase-3 beta [Isoform 1] region 4 namespace: region def: "." [DPO:curators, PMID:11427888] is_a: DPO:000007 ! disordered region [Term] id: DPO:000986 name: ribonuclease P protein component region 1 namespace: region def: "." [DPO:curators, PMID:11258888, PMID:16185070] comment: RNase P is predominantly unfolded when isolated from RNA and small molecule anions in a low-ionic strength buffer. The P protein can be induced to refold by increasing the anion concentration in solution or by the addition of the osmolyte trimethylamine N-oxide (TMAO). is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000041 ! protein-genomic RNA binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:000987 name: hemolysin, chromosomal region 1 namespace: region def: "." [DPO:curators, PMID:7703231] comment: The 61 bp C-terminus disordered region published in the Zhang paper contains discrepancies when compared to the SwisProt sequence. The SwisProt sequence at regions 964, 965, 970 and 996 are L, A, G, A, compared to the disorder paper sequence of S, T, D, S respectively. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000988 name: beta-arrestin-1 [Isoform 1A] region 1 namespace: region def: "." [DPO:curators, PMID:11566136] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000989 name: beta-arrestin-1 [Isoform 1A] region 3 namespace: region def: "." [DPO:curators, PMID:11566136] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:000990 name: nuclear cap-binding protein subunit 1 region 1 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011026 ! nuclear cap-binding protein subunit 1 [Term] id: DPO:000991 name: nuclear cap-binding protein subunit 1 region 2 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011026 ! nuclear cap-binding protein subunit 1 [Term] id: DPO:000992 name: nuclear cap-binding protein subunit 1 region 3 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011026 ! nuclear cap-binding protein subunit 1 [Term] id: DPO:000993 name: nuclear cap-binding protein subunit 1 region 4 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011026 ! nuclear cap-binding protein subunit 1 [Term] id: DPO:000994 name: nuclear cap-binding protein subunit 1 region 5 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011026 ! nuclear cap-binding protein subunit 1 [Term] id: DPO:000995 name: nuclear cap-binding protein subunit 1 region 6 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011026 ! nuclear cap-binding protein subunit 1 [Term] id: DPO:000996 name: nuclear cap-binding protein subunit 2 [Isoform 1] region 1 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000041 ! protein-genomic RNA binding [Term] id: DPO:000997 name: nuclear cap-binding protein subunit 2 [Isoform 1] region 2 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000041 ! protein-genomic RNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:000998 name: nuclear cap-binding protein subunit 2 [Isoform 1] region 3 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region [Term] id: DPO:000999 name: nuclear cap-binding protein subunit 2 [Isoform 1] region 4 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region [Term] id: DPO:001000 name: nuclear cap-binding protein subunit 2 [Isoform 1] region 5 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000041 ! protein-genomic RNA binding [Term] id: DPO:001001 name: nuclear cap-binding protein subunit 2 [Isoform 1] region 6 namespace: region def: "." [DPO:curators, PMID:11545740] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000041 ! protein-genomic RNA binding [Term] id: DPO:001002 name: subtilisin E region 1 namespace: region def: "." [DPO:curators, PMID:11519747] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000011 ! chaperone relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001003 name: calmodulin-sensitive adenylate cyclase region 1 namespace: region def: "." [DPO:curators, PMID:11807546] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001004 name: eukaryotic peptide chain release factor GTP-binding subunit region 1 namespace: region def: "." [DPO:curators, PMID:15099522] is_a: DPO:000007 ! disordered region [Term] id: DPO:001005 name: eukaryotic peptide chain release factor GTP-binding subunit region 2 namespace: region def: "." [DPO:curators, PMID:15099522] comment: Disordered region 2 is contained within Switch I of the protein. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001006 name: eukaryotic peptide chain release factor GTP-binding subunit region 3 namespace: region def: "." [DPO:curators, PMID:15099522] comment: The fragment used for structure determination consisted of residues 196-662. Disordered region 3 is contained within Switch II of the protein. is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001007 name: exostosin-like 2 region 1 namespace: region def: "." [DPO:curators, PMID:12562774] comment: The fragment used to determine the crystal structure consisted of residues 63-327. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007271 ! exostosin-like 2 relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001008 name: acetolactate synthase catalytic subunit, mitochondrial region 1 namespace: region def: "." [DPO:curators, PMID:11902841] comment: The mature protein, consisting of residues 58-687, was used for crystal structure determination. A 47 residue N-terminal peptide containing a hexahistidine tag was added. This region was disordered in monomer A. is_a: DPO:000007 ! disordered region [Term] id: DPO:001009 name: acetolactate synthase catalytic subunit, mitochondrial region 2 namespace: region def: "." [DPO:curators, PMID:11902841] comment: The mature protein, consisting of residues 58-687, was used for crystal structure determination. A 47 residue N-terminal peptide containing a hexahistidine tag was added. This region was disordered in monomer A. is_a: DPO:000007 ! disordered region [Term] id: DPO:001010 name: acetolactate synthase catalytic subunit, mitochondrial region 3 namespace: region def: "." [DPO:curators, PMID:11902841] comment: The mature protein, consisting of residues 58-687, was used for crystal structure determination. A 47 residue N-terminal peptide containing a hexahistidine tag was added. This region was traceable in monomer B, but completely disordered in monomer A. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001011 name: acetolactate synthase catalytic subunit, mitochondrial region 4 namespace: region def: "." [DPO:curators, PMID:11902841] comment: This region is disordered in monomer B, but monomer A contains the additional disordered lysine residue at position 648 in addition to those in monomer B. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001012 name: inosine-5'-monophosphate dehydrogenase region 1 namespace: region def: "." [DPO:curators, PMID:9271497] is_a: DPO:000007 ! disordered region [Term] id: DPO:001013 name: inosine-5'-monophosphate dehydrogenase region 2 namespace: region def: "." [DPO:curators, PMID:9271497] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001014 name: inosine-5'-monophosphate dehydrogenase region 3 namespace: region def: "." [DPO:curators, PMID:9271497] is_a: DPO:000007 ! disordered region [Term] id: DPO:001015 name: inosine-5'-monophosphate dehydrogenase region 4 namespace: region def: "." [DPO:curators, PMID:9271497] is_a: DPO:000007 ! disordered region [Term] id: DPO:001016 name: lipid A export ATP-binding/permease protein msbA region 1 namespace: region def: "." [DPO:curators, PMID:11546864] comment: The electron densities are "diffuse" for amino acids 58 through 63. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023294 ! lipid A export ATP-binding/permease protein msbA relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001017 name: lipid A export ATP-binding/permease protein msbA region 2 namespace: region def: "." [DPO:curators, PMID:11546864] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023294 ! lipid A export ATP-binding/permease protein msbA relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001018 name: lipid A export ATP-binding/permease protein msbA region 3 namespace: region def: "." [DPO:curators, PMID:11546864] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023294 ! lipid A export ATP-binding/permease protein msbA [Term] id: DPO:001019 name: multidrug resistance protein mexA region 1 namespace: region def: "." [DPO:curators, PMID:15226509] comment: The mature protein, consisiting of resisdues 24-383, was used for structure determination. It also had a C24S mutation to prevent fatty acid attachment at the N-terminal. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000042 ! protein-lipid interaction [Term] id: DPO:001020 name: multidrug resistance protein mexA region 2 namespace: region def: "." [DPO:curators, PMID:15226509] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000042 ! protein-lipid interaction [Term] id: DPO:001021 name: sulfotransferase family cytosolic 2B member 1 [Isoform 2 (SULT2B1a)(A)] region 1 namespace: region def: "." [DPO:curators, PMID:12923182, PMID:12923182] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001022 name: sulfotransferase family cytosolic 2B member 1 [Isoform 2 (SULT2B1a)(A)] region 2 namespace: region def: "." [DPO:curators, PMID:12923182] is_a: DPO:000007 ! disordered region [Term] id: DPO:001023 name: chemotaxis protein cheA [Isoform cheA(L)(Long)(Large)] region 1 namespace: region def: "." [DPO:curators, PMID:8639521] comment: The experimental fragment consisted of residues 124-257 of the Swiss Prot sequence. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000025252 ! chemotaxis protein cheA isoform 2 relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001024 name: chemotaxis protein cheA [Isoform cheA(L)(Long)(Large)] region 2 namespace: region def: "." [DPO:curators, PMID:8639521] comment: The experimental fragment consisted of residues 124-257 of the Swiss Prot sequence. is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000025252 ! chemotaxis protein cheA isoform 2 relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001025 name: ras-related C3 botulinum toxin substrate 1 [Isoform A (Rac1A)] region 1 namespace: region def: "." [DPO:curators, PMID:14625275] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001026 name: ras-related C3 botulinum toxin substrate 1 [Isoform A (Rac1A)] region 2 namespace: region def: "." [DPO:curators, PMID:14625275] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001027 name: 10 kDa chaperonin region 1 namespace: region def: "." [DPO:curators, PMID:8876186, PMID:16223749, PMID:15238634] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000011 ! chaperone relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001028 name: biotin carboxyl carrier protein of acetyl-CoA carboxylase region 1 namespace: region def: "." [DPO:curators, PMID:11956202] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001029 name: protein jagged-1 region 1 namespace: region def: "." [DPO:curators, PMID:16427310] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001921 ! protein jagged-1 relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001030 name: thymidine kinase region 1 namespace: region def: "." [DPO:curators, PMID:7628623] is_a: DPO:000007 ! disordered region [Term] id: DPO:001031 name: thymidine kinase region 2 namespace: region def: "." [DPO:curators, PMID:7628623] is_a: DPO:000007 ! disordered region [Term] id: DPO:001032 name: thymidine kinase region 3 namespace: region def: "." [DPO:curators, PMID:7628623] is_a: DPO:000007 ! disordered region [Term] id: DPO:001033 name: thymidine kinase region 4 namespace: region def: "." [DPO:curators, PMID:9336833] is_a: DPO:000007 ! disordered region [Term] id: DPO:001034 name: thymidine kinase region 5 namespace: region def: "." [DPO:curators, PMID:9336833] is_a: DPO:000007 ! disordered region [Term] id: DPO:001035 name: thymidine kinase region 6 namespace: region def: "." [DPO:curators, PMID:9336833] is_a: DPO:000007 ! disordered region [Term] id: DPO:001036 name: protein phosphatase 1 regulatory subunit 1B region 1 namespace: region def: "." [DPO:curators, PMID:6319628] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:001037 name: DNA-binding protein fis region 1 namespace: region def: "." [DPO:curators, PMID:1619650, PMID:1946369, PMID:11183780, PMID:9362499] comment: A mutant Fis crystal structure reveals that the transactivation domain of Fis contains two beta-hairpin arms that protrude over 20 Å from the protein core (EMBO J. 1997, 16, 6860-6873). The most critical activating residues are located near the tips of the beta-arms. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000022626 ! DNA-binding protein fis relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:001038 name: histone H1 region 1 namespace: region def: "." [DPO:curators, PMID:14654695, PMID:15050829, PMID:15878177] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001039 name: protein Rev region 1 namespace: region def: "." [DPO:curators, PMID:7510518, PMID:2125482] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000036 ! nuclear localization relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001040 name: band 3 anion transport protein region 1 namespace: region def: "." [DPO:curators, PMID:11049968, PMID:16285715] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002033 ! band 3 anion transport protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:001041 name: band 3 anion transport protein region 2 namespace: region def: "." [DPO:curators, PMID:11049968, PMID:16285715] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002033 ! band 3 anion transport protein relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001042 name: serine/threonine-protein kinase PLK1 region 1 namespace: region def: "." [DPO:curators, PMID:14592974] comment: The fragment used to determine this structure consisted of residues 345-603. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012870 ! serine/threonine-protein kinase PLK1 relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001043 name: serine/threonine-protein kinase PLK1 region 2 namespace: region def: "." [DPO:curators, PMID:14592974] comment: The fragment used to determine this structure consisted of residues 345-603. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012870 ! serine/threonine-protein kinase PLK1 [Term] id: DPO:001044 name: serine/threonine-protein kinase PLK1 region 3 namespace: region def: "." [DPO:curators, PMID:14592974] comment: The fragment used to determine this structure consisted of residues 345-603. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012870 ! serine/threonine-protein kinase PLK1 [Term] id: DPO:001045 name: L-rhamnose isomerase region 1 namespace: region def: "." [DPO:curators, PMID:10891278] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023733 ! L-rhamnose isomerase relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001046 name: non-histone chromosomal protein 6A region 1 namespace: region def: "." [DPO:curators, PMID:10228169] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001047 name: non-histone chromosomal protein 6A region 2 namespace: region def: "." [DPO:curators, PMID:10228169] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001048 name: lactose operon repressor region 1 namespace: region def: "." [DPO:curators, PMID:8683581] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023070 ! lactose operon repressor [Term] id: DPO:001049 name: lactose operon repressor region 2 namespace: region def: "." [DPO:curators, PMID:8683581] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023070 ! lactose operon repressor relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001050 name: lactose operon repressor region 3 namespace: region def: "." [DPO:curators, PMID:8683581] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023070 ! lactose operon repressor [Term] id: DPO:001051 name: lactose operon repressor region 4 namespace: region def: "." [DPO:curators, PMID:9032054] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023070 ! lactose operon repressor relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001052 name: lactose operon repressor region 5 namespace: region def: "." [DPO:curators, PMID:9032054] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023070 ! lactose operon repressor relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001053 name: lactose operon repressor region 6 namespace: region def: "." [DPO:curators, PMID:8638105] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023070 ! lactose operon repressor relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001054 name: UPF0424 protein At3g04780 region 1 namespace: region def: "." [DPO:curators, PMID:15741346] is_a: DPO:000007 ! disordered region [Term] id: DPO:001055 name: transitional endoplasmic reticulum ATPase region 1 namespace: region def: "." [DPO:curators, PMID:15740751] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017273 ! transitional endoplasmic reticulum ATPase relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:001056 name: transitional endoplasmic reticulum ATPase region 2 namespace: region def: "." [DPO:curators, PMID:15740751] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017273 ! transitional endoplasmic reticulum ATPase [Term] id: DPO:001057 name: canavalin region 1 namespace: region def: "." [DPO:curators, PMID:8310056] is_a: DPO:000007 ! disordered region [Term] id: DPO:001058 name: canavalin region 2 namespace: region def: "." [DPO:curators, PMID:8310056] is_a: DPO:000007 ! disordered region [Term] id: DPO:001059 name: canavalin region 3 namespace: region def: "." [DPO:curators, PMID:8310056] is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:001060 name: canavalin region 4 namespace: region def: "." [DPO:curators, PMID:8310056] is_a: DPO:000007 ! disordered region [Term] id: DPO:001061 name: DNA repair protein RAD52 homolog region 1 namespace: region def: "." [DPO:curators, PMID:12370410] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013678 ! DNA repair protein RAD52 relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001062 name: cysteine and glycine-rich protein 2 region 1 namespace: region def: "." [DPO:curators, PMID:9722554] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001063 name: cyclic nucleotide-gated cation channel beta-1 [Isoform GARP1] region 1 namespace: region def: "." [DPO:curators, PMID:16280326] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_function DPO:000017 ! molecular recognition scavenger relationship: has_subfunction DPO:000027 ! entropic bristle relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001064 name: werner syndrome ATP-dependent helicase region 1 namespace: region def: "." [DPO:curators, PMID:16339893] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000017455 ! werner syndrome ATP-dependent helicase [Term] id: DPO:001065 name: alpha-crystallin A chain region 1 namespace: region def: "." [DPO:curators, PMID:12235146, PMID:9650074] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005907 ! alpha-crystallin A chain relationship: has_function DPO:000011 ! chaperone relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001066 name: alpha-crystallin B chain region 1 namespace: region def: "." [DPO:curators, PMID:12235146, PMID:9650074] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005908 ! alpha-crystallin B chain relationship: has_function DPO:000011 ! chaperone relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001067 name: suppressor of cytokine signaling 3 region 1 namespace: region def: "." [DPO:curators, PMID:16302975] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000015394 ! suppressor of cytokine signaling 3 relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function [Term] id: DPO:001068 name: phosphoprotein region 1 namespace: region def: "." [DPO:curators, PMID:16361428] is_a: DPO:000007 ! disordered region [Term] id: DPO:001069 name: phosphoprotein region 2 namespace: region def: "." [DPO:curators, PMID:16361428] is_a: DPO:000007 ! disordered region [Term] id: DPO:001070 name: FH1/FH2 domain-containing protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:16361249] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007516 ! FH1/FH2 domain-containing protein 1 relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001071 name: bcl-2-like protein 1 [Isoform Bcl-X(L)] region 1 namespace: region def: "." [DPO:curators, PMID:9346936] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000021 ! autoregulatory [Term] id: DPO:001072 name: bcl-2-like protein 1 [Isoform Bcl-X(L)] region 2 namespace: region def: "." [DPO:curators, PMID:9346936] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001073 name: xanthine dehydrogenase/oxidase region 1 namespace: region def: "." [DPO:curators, PMID:11005854] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000026 ! electron transfer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001074 name: xanthine dehydrogenase/oxidase region 2 namespace: region def: "." [DPO:curators, PMID:11005854] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000026 ! electron transfer relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001075 name: xanthine dehydrogenase/oxidase region 3 namespace: region def: "." [DPO:curators, PMID:11005854] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000026 ! electron transfer relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001076 name: AP-2 complex subunit mu-1 region 1 namespace: region def: "." [DPO:curators, PMID:12086608] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001077 name: AP-2 complex subunit mu-1 region 2 namespace: region def: "." [DPO:curators, PMID:12086608] is_a: DPO:000007 ! disordered region [Term] id: DPO:001078 name: AP-2 complex subunit mu-1 region 3 namespace: region def: "." [DPO:curators, PMID:12086608] is_a: DPO:000007 ! disordered region [Term] id: DPO:001079 name: AP-2 complex subunit mu-1 region 4 namespace: region def: "." [DPO:curators, PMID:12086608] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001080 name: tetratricopeptide repeat protein 11 region 1 namespace: region def: "." [DPO:curators, PMID:14623186] is_a: DPO:000007 ! disordered region [Term] id: DPO:001081 name: tetratricopeptide repeat protein 11 region 2 namespace: region def: "." [DPO:curators, PMID:14623186] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001082 name: tetratricopeptide repeat protein 11 region 3 namespace: region def: "." [DPO:curators, PMID:14623186] comment: The length of the recombinant protein is the same as that of the wild-type protein but the last seven amino acids are EHHHHHH instead of AVSKSKS. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001083 name: rab proteins geranylgeranyltransferase component A 1 region 1 namespace: region def: "." [DPO:curators, PMID:12620235, PMID:11886217] is_a: DPO:000007 ! disordered region [Term] id: DPO:001084 name: rab proteins geranylgeranyltransferase component A 1 region 2 namespace: region def: "." [DPO:curators, PMID:12620235, PMID:11886217] is_a: DPO:000007 ! disordered region [Term] id: DPO:001085 name: rab proteins geranylgeranyltransferase component A 1 region 3 namespace: region def: "." [DPO:curators, PMID:12620235, PMID:11886217] is_a: DPO:000007 ! disordered region [Term] id: DPO:001086 name: rab proteins geranylgeranyltransferase component A 1 region 4 namespace: region def: "." [DPO:curators, PMID:12620235, PMID:11886217] is_a: DPO:000007 ! disordered region [Term] id: DPO:001087 name: rab proteins geranylgeranyltransferase component A 1 region 5 namespace: region def: "." [DPO:curators, PMID:12620235, PMID:11886217] is_a: DPO:000007 ! disordered region [Term] id: DPO:001088 name: rab proteins geranylgeranyltransferase component A 1 region 6 namespace: region def: "." [DPO:curators, PMID:12620235, PMID:11886217] is_a: DPO:000007 ! disordered region [Term] id: DPO:001089 name: rho-GTPase-activating protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:9009196] comment: Residues 1-34 of the fragment correspond to residues 198-231 of the full-length protein. is_a: DPO:000007 ! disordered region [Term] id: DPO:001090 name: ectodysplasin A region 2 namespace: region def: "." [DPO:curators, PMID:14656435] is_a: DPO:000007 ! disordered region [Term] id: DPO:001091 name: ectodysplasin A region 3 namespace: region def: "." [DPO:curators, PMID:14656435] is_a: DPO:000007 ! disordered region [Term] id: DPO:001092 name: colicin-N region 1 namespace: region def: "." [DPO:curators, PMID:15004032, PMID:12679333, PMID:11099384, PMID:9680221, PMID:9687368, PMID:15465872, PMID:18573254] comment: The translocation domain of this protein is needed for the importing of the protein across the outer membrane. It binds to the third domain of TolA protein, and probably also binds to the OmpF protein. Residues 1-40 may be removed without abolishing toxicity. Residues 40-67 are essential for TolA binding. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001093 name: ribonucleoside-diphosphate reductase M2 subunit region 1 namespace: region def: "." [DPO:curators, PMID:8876648, PMID:7589490] comment: The N-terminal residues are not essential for enzymatic activity but the N-terminal tail may function in cell-cycle regulation of the enzyme and protein degradation. is_a: DPO:000007 ! disordered region [Term] id: DPO:001094 name: ribonucleoside-diphosphate reductase M2 subunit region 2 namespace: region def: "." [DPO:curators, PMID:8876648, PMID:8130196, PMID:7589490] comment: The C-terminus of R2 is involved in the interaction between R1 and R2. The C-terminal seven residues go from disorder to order upon binding to R1. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001095 name: gamma-aminobutyric acid type B receptor, subunit 1 [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:15304491] comment: This region corresponds to the N-terminal CCP-module like sequence. is_a: DPO:000010 ! disordered - molten globule region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001096 name: mothers against decapentaplegic homolog 4 region 1 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001097 name: mothers against decapentaplegic homolog 4 region 2 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001098 name: mothers against decapentaplegic homolog 4 region 3 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001099 name: mothers against decapentaplegic homolog 4 region 4 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001100 name: mothers against decapentaplegic homolog 4 region 5 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001101 name: mothers against decapentaplegic homolog 4 region 6 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001102 name: mothers against decapentaplegic homolog 4 region 7 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001103 name: mothers against decapentaplegic homolog 4 region 8 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:001104 name: mothers against decapentaplegic homolog 4 region 9 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001105 name: mothers against decapentaplegic homolog 4 region 10 namespace: region def: "." [DPO:curators, PMID:10647180] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001106 name: hypothetical protein MJ0246 region 1 namespace: region def: "." [DPO:curators, PMID:15322276, PMID:9506949] comment: In the Vamvaca et al. paper, the six terminal amino acid residues of the protein were replaced by the following sequence: LEHHHHHH. is_a: DPO:000010 ! disordered - molten globule region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001107 name: major prion protein region 1 namespace: region def: "." [DPO:curators, PMID:10618385] is_a: DPO:000007 ! disordered region [Term] id: DPO:001108 name: major prion protein region 2 namespace: region def: "." [DPO:curators, PMID:10618385] is_a: DPO:000007 ! disordered region [Term] id: DPO:001109 name: ankyrin-2 (202 KDa splice form) region 1 namespace: region def: "." [DPO:curators, PMID:16368689] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000004034 ! ankyrin-2 relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001110 name: NF-kappaB inhibitor alpha region 1 namespace: region def: "." [DPO:curators, PMID:9872404, PMID:7891711] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003293 ! NF-kappa-B inhibitor alpha [Term] id: DPO:001111 name: NF-kappaB inhibitor alpha region 2 namespace: region def: "." [DPO:curators, PMID:9872404, PMID:7891711] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003293 ! NF-kappa-B inhibitor alpha relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001112 name: transcription factor HY5 region 1 namespace: region def: "." [DPO:curators, PMID:17001643] is_a: DPO:000009 ! disordered - pre-molten globule region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000057 ! pre-molten globule to order transition [Term] id: DPO:001113 name: opaque 2 region 1 namespace: region def: "." [DPO:curators, PMID:15096055] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001114 name: lipoprotein GNA1870 (type 1) region 1 namespace: region def: "." [DPO:curators, PMID:16407174] is_a: DPO:000007 ! disordered region [Term] id: DPO:001115 name: peroxisomal biogenesis factor 5 region 1 namespace: region def: "." [DPO:curators, PMID:16403517, PMID:8991089, PMID:11865044] is_a: DPO:000009 ! disordered - pre-molten globule region relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000011 ! chaperone relationship: has_subfunction DPO:000048 ! self-transport through channel relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000054 ! pre-molten globule state [Term] id: DPO:001116 name: cryptochrome 2 region 1 namespace: region def: "." [DPO:curators, PMID:15751956] comment: The C-terminal domain of human CRY2 (hCRY2-CT, residues 490-593) was studied. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001117 name: cryptochrome 1 apoprotein region 1 namespace: region def: "." [DPO:curators, PMID:15751956] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000033 ! intraprotein interaction relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001118 name: H/ACA ribonucleoprotein complex subunit 3 region 1 namespace: region def: "." [DPO:curators, PMID:16373493] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001119 name: H/ACA ribonucleoprotein complex subunit 3 region 2 namespace: region def: "." [DPO:curators, PMID:16373493] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001120 name: H/ACA ribonucleoprotein complex subunit 3 region 3 namespace: region def: "." [DPO:curators, PMID:16373493] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001121 name: sorting nexin GRD19 region 1 namespace: region def: "." [DPO:curators, PMID:14514667] is_a: DPO:000007 ! disordered region [Term] id: DPO:001122 name: sorting nexin GRD19 region 2 namespace: region def: "." [DPO:curators, PMID:14514667] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:001123 name: prion protein region 1 namespace: region def: "." [DPO:curators, PMID:12890024, PMID:11685242] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001124 name: tricorn protease region 1 namespace: region def: "." [DPO:curators, PMID:11719810] is_a: DPO:000007 ! disordered region [Term] id: DPO:001125 name: tricorn protease region 2 namespace: region def: "." [DPO:curators, PMID:11719810] is_a: DPO:000007 ! disordered region [Term] id: DPO:001126 name: ubiquitin-like 1-activating enzyme E1A region 1 namespace: region def: "." [DPO:curators, PMID:15660128] is_a: DPO:000007 ! disordered region [Term] id: DPO:001127 name: ubiquitin-like 1-activating enzyme E1A region 2 namespace: region def: "." [DPO:curators, PMID:15660128] is_a: DPO:000007 ! disordered region [Term] id: DPO:001128 name: ubiquitin-like 1-activating enzyme E1B region 1 namespace: region def: "." [DPO:curators, PMID:15660128] comment: Residues 1-158 are part of the protein's adenylation domain. is_a: DPO:000007 ! disordered region [Term] id: DPO:001129 name: ubiquitin-like 1-activating enzyme E1B region 2 namespace: region def: "." [DPO:curators, PMID:15660128] comment: Residues 159-386 make up the catalytic cys domain of the protein. It contains Cys173 which is the catalytic cysteine responsible for E1-SUMO-thioester bond formation. is_a: DPO:000007 ! disordered region [Term] id: DPO:001130 name: ubiquitin-like 1-activating enzyme E1B region 3 namespace: region def: "." [DPO:curators, PMID:15660128] comment: Residues 159-386 make up the catalytic cys domain of the protein. It contains Cys173 which is the catalytic cysteine responsible for E1-SUMO-thioester bond formation. is_a: DPO:000007 ! disordered region [Term] id: DPO:001131 name: ubiquitin-like 1-activating enzyme E1B region 4 namespace: region def: "." [DPO:curators, PMID:15660128] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000036 ! nuclear localization [Term] id: DPO:001132 name: ribonucleoside-diphosphate reductase small chain 1 region 1 namespace: region def: "." [DPO:curators, PMID:11526233] is_a: DPO:000007 ! disordered region [Term] id: DPO:001133 name: ribonucleoside-diphosphate reductase small chain 1 region 2 namespace: region def: "." [DPO:curators, PMID:11526233] is_a: DPO:000007 ! disordered region [Term] id: DPO:001134 name: ribonucleoside-diphosphate reductase small chain 1 region 3 namespace: region def: "." [DPO:curators, PMID:11526233] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:001135 name: ribonucleoside-diphosphate reductase small chain 2 region 1 namespace: region def: "." [DPO:curators, PMID:11526233] is_a: DPO:000007 ! disordered region [Term] id: DPO:001136 name: ribonucleoside-diphosphate reductase small chain 2 region 2 namespace: region def: "." [DPO:curators, PMID:11526233] is_a: DPO:000007 ! disordered region [Term] id: DPO:001137 name: ribonucleoside-diphosphate reductase small chain 2 region 3 namespace: region def: "." [DPO:curators, PMID:11526233] is_a: DPO:000007 ! disordered region [Term] id: DPO:001138 name: ribonucleoside-diphosphate reductase small chain 2 region 4 namespace: region def: "." [DPO:curators, PMID:11526233] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:001139 name: decorin [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:15501918] comment: This region corresponds to residues 1-21 of the mature protein. is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000032 ! glycosylation [Term] id: DPO:001140 name: growth factor receptor-bound protein 14 region 1 namespace: region def: "." [DPO:curators, PMID:14623073, PMID:15465854] comment: Residues 399-407 may be transiently structured, and may be important in the binding of Grb14 binding to its partner via a structural transition. is_a: DPO:000008 ! disordered - extended region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001141 name: dystroglycan [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:11257514, PMID:14622018] comment: This protein is highly disordered, but steady-state NOE experiments indicate that the protein presents two regions of different mobility. The first one, between residues 659-722, is characterized by a limited degree of mobility, whereas the C-terminal portion, containing about 30 amino acids, is highly flexible. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001142 name: androgen receptor region 1 namespace: region def: "." [DPO:curators, PMID:11896058, PMID:15023052] comment: Binding of NTD to target protein TFIIF transcription factor induces folding into a more stable conformation. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004191 ! androgen receptor relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001143 name: androgen receptor region 2 namespace: region def: "." [DPO:curators, PMID:11896058] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000004191 ! androgen receptor relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:001144 name: androgen receptor region 3 namespace: region def: "." [DPO:curators, PMID:11896058] is_a: DPO:000006 ! ordered region relationship: part_of PRO:000004191 ! androgen receptor relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000052 ! ordered state [Term] id: DPO:001145 name: C-terminal-binding protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:16597837] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000036 ! nuclear localization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001146 name: DNA repair enzyme region 1 namespace: region def: "." [DPO:curators, PMID:16605254] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000043 ! protein-mRNA binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001147 name: positive cofactor 4 region 1 namespace: region def: "." [DPO:curators, PMID:16605275] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000018 ! acetylation relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001148 name: B-cell antigen receptor complex-associated protein alpha-chain [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:14967045] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001285 ! B-cell antigen receptor complex-associated protein alpha-chain relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001149 name: B-cell antigen receptor complex-associated protein beta-chain [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:14967045] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001286 ! B-cell antigen receptor complex-associated protein beta-chain relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000017 ! molecular recognition scavenger relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001150 name: DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide region 1 namespace: region def: "." [DPO:curators, PMID:16632472] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012994 ! DNA-directed RNA polymerases I, II, and III subunit RPABC3 [Term] id: DPO:001151 name: T-cell surface glycoprotein CD3 delta chain [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:14967045] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001019 ! CD3 delta relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001152 name: T-cell surface glycoprotein CD3 epsilon chain [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:14967045] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001020 ! CD3 epsilon relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001153 name: T-cell surface glycoprotein CD3 gamma chain [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:14967045] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000001021 ! CD3 gamma relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001154 name: high affinity immunoglobulin epsilon receptor gamma-subunit [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:14967045] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000007432 ! high affinity immunoglobulin epsilon receptor subunit gamma relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000038 ! polymerization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001155 name: nuclear protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:11056169] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000036 ! nuclear localization relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001156 name: cystatin B region 1 namespace: region def: "." [DPO:curators, PMID:16155205] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001157 name: 50S ribosomal protein L11 region 1 namespace: region def: "." [DPO:curators, PMID:8989327, PMID:9398519] comment: Experimentally characterized region 1 was studied in the context of the C-terminal domain of the protein, 76 amino acids total length. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000041 ! protein-genomic RNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001158 name: acylphosphatase region 1 namespace: region def: "." [DPO:curators, PMID:16287076, PMID:14724277] is_a: DPO:000007 ! disordered region [Term] id: DPO:001159 name: seryl-tRNA synthetase region 1 namespace: region def: "." [DPO:curators, PMID:8128220, PMID:8230201] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000046 ! protein-tRNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001160 name: seryl-tRNA synthetase region 2 namespace: region def: "." [DPO:curators, PMID:8128220, PMID:8654381] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000046 ! protein-tRNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001161 name: seryl-tRNA synthetase region 3 namespace: region def: "." [DPO:curators, PMID:8128220, PMID:8654381, PMID:8230201] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000046 ! protein-tRNA binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001162 name: seryl-tRNA synthetase region 4 namespace: region def: "." [DPO:curators, PMID:8128220] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000046 ! protein-tRNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001163 name: seryl-tRNA synthetase region 5 namespace: region def: "." [DPO:curators, PMID:8230201] is_a: DPO:000007 ! disordered region [Term] id: DPO:001164 name: human serum albumin [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:10388840] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003918 ! serum albumin [Term] id: DPO:001165 name: human serum albumin [Precursor] region 2 namespace: region def: "." [DPO:curators, PMID:10388840] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000003918 ! serum albumin relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001166 name: undecaprenyl Pyrophosphatase synthase from E. Coli region 1 namespace: region def: "." [DPO:curators, PMID:11581264] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000031 ! flexible linker/spacer [Term] id: DPO:001167 name: myomesin region 1 namespace: region def: "." [DPO:curators, PMID:15890201] comment: The elastic properties of Myomesin are modified by the alternative splicing that creates the EH-segment. The EH-isoform is the main myomesin species in the embryonic heart of all higher vertebrates. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000012 ! entropic chain relationship: has_subfunction DPO:000029 ! entropic spring relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001168 name: bcl-2-like protein 11 region 1 namespace: region def: "." [DPO:curators, PMID:16645638] comment: To obtain soluble protein, it was necessary to delete the 27 C-terminal hydrophobic residues, creating the deltaC27 isoform. The deleted C-terminal residues are predicted to form a TM helix. is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002187 ! Bcl2-like protein 11 relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001169 name: adenomatous polyposis coli region 1 namespace: region def: "." [DPO:curators, PMID:16753179] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000004122 ! adenomatous polyposis coli protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001170 name: **Naked2** region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011233 ! protein naked cuticle 2 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000030 ! fatty acylation (myristolation and palmitoylation) relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001171 name: securin region 1 namespace: region def: "." [DPO:curators, PMID:15929994] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000013486 ! securin relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000016 ! molecular recognition effector relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001172 name: Nogo-B region 1 namespace: region def: "." [DPO:curators, PMID:17397058] is_a: DPO:000007 ! disordered region [Term] id: DPO:001173 name: Nogo-B region 2 namespace: region def: "." [DPO:curators, PMID:17397058] is_a: DPO:000007 ! disordered region [Term] id: DPO:001174 name: Nogo-A region 1 namespace: region def: "." [DPO:curators, PMID:17397058] is_a: DPO:000007 ! disordered region [Term] id: DPO:001175 name: seminal vesicle secretory protein 4 [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:18215165, PMID:17253790, PMID:14717694, PMID:10583398] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000018 ! acetylation relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:001176 name: plasmid partition protein ParG region 1 namespace: region def: "." [DPO:curators, PMID:15951570] is_a: DPO:000007 ! disordered region [Term] id: DPO:001177 name: dehydrin DHN1 region 1 namespace: region def: "." [DPO:curators, PMID:12529538] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001178 name: abscisic acid stress ripening 1 region 1 namespace: region def: "." [DPO:curators, PMID:17189335] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000034 ! metal binding relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001179 name: thylakoid soluble phosphoprotein region 1 namespace: region def: "." [DPO:curators, PMID:17176085] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001180 name: CP12 [A. thaliana] region 1 namespace: region def: "." [DPO:curators, PMID:17947231] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:001181 name: fesselin region 1 namespace: region def: "." [DPO:curators, PMID:17676886] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001182 name: septin-4 region 1 namespace: region def: "." [DPO:curators, PMID:17105210] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000014656 ! septin-4 [Term] id: DPO:001183 name: latent membrane protein 2A N-terminal domain region 1 namespace: region def: "." [DPO:curators, PMID:17174309] is_a: DPO:000007 ! disordered region [Term] id: DPO:001184 name: methyl-CpG-binding protein 2 region 2 namespace: region def: "." [DPO:curators, PMID:17371874] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010277 ! methyl-CpG-binding protein 2 relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001185 name: methyl-CpG-binding protein 2 region 3 namespace: region def: "." [DPO:curators, PMID:17371874] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010277 ! methyl-CpG-binding protein 2 [Term] id: DPO:001186 name: methyl-CpG-binding protein 2 region 4 namespace: region def: "." [DPO:curators, PMID:17371874] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010277 ! methyl-CpG-binding protein 2 relationship: has_subfunction DPO:000036 ! nuclear localization relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001187 name: methyl-CpG-binding protein 2 region 5 namespace: region def: "." [DPO:curators, PMID:17371874] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010277 ! methyl-CpG-binding protein 2 relationship: has_subfunction DPO:000040 ! protein-DNA binding [Term] id: DPO:001188 name: dribble region 1 namespace: region def: "." [DPO:curators, PMID:16542639] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000045 ! protein-rRNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001189 name: melanophilin region 1 namespace: region def: "." [DPO:curators, PMID:17513864] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000010456 ! melanophilin relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001190 name: VPg region 1 namespace: region def: "." [DPO:curators, PMID:17971447] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000036 ! nuclear localization relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001191 name: cytochrome c oxidase copper chaperone [H. sapiens] region 1 namespace: region def: "." [DPO:curators, PMID:18093982] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000005773 ! cytochrome c oxidase copper chaperone relationship: has_function DPO:000011 ! chaperone relationship: has_subfunction DPO:000034 ! metal binding [Term] id: DPO:001192 name: aplysia LAPS18-like protein region 1 namespace: region def: "." [DPO:curators, PMID:18078811] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000051 ! transactivation (transcriptional activation) relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001193 name: huntingtin-interacting protein K region 1 namespace: region def: "." [DPO:curators, PMID:18076027] is_a: DPO:000009 ! disordered - pre-molten globule region relationship: part_of PRO:000008854 ! huntingtin-interacting protein K relationship: has_structural_basis_for_function DPO:000054 ! pre-molten globule state [Term] id: DPO:001194 name: parvalbumin alpha region 1 namespace: region def: "." [DPO:curators, PMID:18260106] is_a: DPO:000007 ! disordered region [Term] id: DPO:001195 name: B-type natriuretic peptide region 1 namespace: region def: "." [DPO:curators, PMID:17399679] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011375 ! natriuretic peptides B [Term] id: DPO:001196 name: sigma-E factor negative regulatory protein region 1 namespace: region def: "." [DPO:curators, PMID:18421143] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000023877 ! sigma-E factor negative regulatory protein relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000047 ! regulation of proteolysis in vivo relationship: has_subfunction DPO:000044 ! protein-protein binding [Term] id: DPO:001197 name: neuroligin 3 region 1 namespace: region def: "." [DPO:curators, PMID:18456828] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000011256 ! neuroligin-3 relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001198 name: NACHT, LRR and PYD domains-containing protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:14527388] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001199 name: beta-synuclein region 1 namespace: region def: "." [DPO:curators, PMID:17681539] is_a: DPO:000008 ! disordered - extended region relationship: part_of PRO:000015324 ! beta-synuclein [Term] id: DPO:001200 name: vinculin region 1 namespace: region def: "." [DPO:curators, PMID:15642262] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:001201 name: acetyl-CoA carboxylase region 1 namespace: region def: "." [DPO:curators, PMID:15341732] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000030 ! fatty acylation (myristolation and palmitoylation) relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001202 name: acetyl-CoA carboxylase region 2 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000030 ! fatty acylation (myristolation and palmitoylation) relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001203 name: farnesyltransferase, CAAX box, alpha region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000059 ! order to disorder transition [Term] id: DPO:001204 name: chorismate Synthase region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site [Term] id: DPO:001205 name: chorismate Synthase region 2 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region [Term] id: DPO:001206 name: chorismate Synthase region 3 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region [Term] id: DPO:001207 name: genome Polyprotein region 1 namespace: region def: "." [DPO:curators, PMID:17971447, PMID:1431807] is_a: DPO:000007 ! disordered region [Term] id: DPO:001208 name: calcium-Dependent Protein Kinase-alpha region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region [Term] id: DPO:001209 name: calcium-Dependent Protein Kinase-alpha region 2 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region [Term] id: DPO:001210 name: trafficking protein particle complex subunit 4 region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001211 name: trafficking protein particle complex subunit 4 region 2 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001212 name: bcl2 antagonist of cell death region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000002184 ! Bcl2 antagonist of cell death relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001213 name: B-Myc region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000020 ! apoptosis relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001214 name: hemagglutinin [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:8072525] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000023 ! disordered region is not essential for protein function relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001215 name: hemagglutinin [Precursor] region 2 namespace: region def: "." [DPO:curators, PMID:8072525] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001216 name: pilosulin-1 [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:15639237] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001217 name: paired box gene 6 isoform a region 1 namespace: region def: "." [DPO:curators, PMID:10346815] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001218 name: EMILIN1 protein region 1 namespace: region def: "." [DPO:curators, PMID:18463100] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001219 name: signal recognition particle 19 kDa protein region 1 namespace: region def: "." [DPO:curators, PMID:17434535] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000041 ! protein-genomic RNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001220 name: macrophage metalloelastase [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:15809432] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001221 name: macrophage metalloelastase [Precursor] region 2 namespace: region def: "." [DPO:curators, PMID:15809432] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001222 name: natriuretic peptides B [Precursor] region 1 namespace: region def: "." [DPO:curators, PMID:17399679] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001223 name: **Foot and Mouth Disease Virus** region 1 namespace: region def: "." [DPO:curators, PMID:2537470] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000049 ! structural mortar relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001224 name: **Foot and Mouth Disease Virus** region 2 namespace: region def: "." [DPO:curators, PMID:2537470] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000049 ! structural mortar relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001225 name: serum response factor region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000040 ! protein-DNA binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001226 name: alkylmercury Lyase region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001227 name: alkylmercury Lyase region 2 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001228 name: alkylmercury Lyase region 3 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001229 name: alkylmercury Lyase region 4 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001230 name: ataxin-3 region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001231 name: ataxin-3 region 2 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001232 name: amidophosphoribosyltransferase region 1 namespace: region def: "." [DPO:curators, PMID:9914248] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001233 name: amidophosphoribosyltransferase region 2 namespace: region def: "." [DPO:curators, PMID:9914248] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001234 name: amidophosphoribosyltransferase region 3 namespace: region def: "." [DPO:curators, PMID:9914248] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001235 name: ribosomal protein L5 region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_subfunction DPO:000021 ! autoregulatory relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001236 name: ribosomal protein L5 region 2 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001237 name: pollen allergen Ole e 6 region 1 namespace: region def: "." [DPO:curators, PMID:15247256] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000049 ! structural mortar relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001238 name: ras-related protein Ral-A region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001239 name: ras-related protein Ral-A region 2 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001240 name: ras-related protein Ral-A region 3 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001241 name: brazzein region 1 namespace: region def: "." [DPO:curators] comment: Contains sweet tasting receptors on protein. is_a: DPO:000007 ! disordered region relationship: has_function DPO:000014 ! modification site relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000053 ! disordered state [Term] id: DPO:001242 name: deoxycytidylate deaminase region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000031 ! flexible linker/spacer relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001243 name: protein starmaker [Precursor] region 1 namespace: region def: "." [DPO:curators] is_a: DPO:000007 ! disordered region relationship: has_function DPO:000015 ! molecular assembly relationship: has_subfunction DPO:000037 ! phosphorylation relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_subfunction DPO:000044 ! protein-protein binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001244 name: flavivirus E Glycoprotein region 1 namespace: region def: "." [DPO:curators, PMID:15341726] comment: This region is part of a flexible loop spanning from residues 16-20. is_a: DPO:000007 ! disordered region [Term] id: DPO:001245 name: flavivirus E Glycoprotein region 2 namespace: region def: "." [DPO:curators, PMID:15341726] is_a: DPO:000007 ! disordered region [Term] id: DPO:001246 name: IA3 region 1 namespace: region def: "." [DPO:curators, PMID:15065849] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000047 ! regulation of proteolysis in vivo relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001247 name: RWD domain-containing protein 1 region 1 namespace: region def: "." [DPO:curators, PMID:18954556] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000014370 ! RWD domain-containing protein 1 [Term] id: DPO:001248 name: core protein region 1 namespace: region def: "." [DPO:curators, PMID:18992225] is_a: DPO:000007 ! disordered region [Term] id: DPO:001249 name: adenylate cyclase region 1 namespace: region def: "." [DPO:curators, PMID:19015266] is_a: DPO:000007 ! disordered region relationship: has_subfunction DPO:000050 ! substrate/ligand binding relationship: has_structural_basis_for_function DPO:000056 ! disorder to order transition [Term] id: DPO:001250 name: PEP-19 region 1 namespace: region def: "." [DPO:curators, PMID:19106096] is_a: DPO:000007 ! disordered region relationship: part_of PRO:000012431 ! purkinje cell protein 4 relationship: has_subfunction DPO:000044 ! protein-protein binding [Typedef] id: has_function name: has_function [Typedef] id: has_subfunction name: has_subfunction [Typedef] id: has_structural_basis_for_function name: has_structural_basis_for_function [Typedef] id: has_function name: has_function [Typedef] id: has_subfunction name: has_subfunction [Typedef] id: has_structural_basis_for_function name: has_structural_basis_for_function